Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL731532.1-201ENST00000623972 4236 ntBASIC5.52□□□□□ -1.53
ATG4DQ86TL0 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.52□□□□□ -1.53
ATG4DQ86TL0 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AC018628.1-201ENST00000624147 3819 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 NACAP2-201ENST00000318548 624 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 Y_RNA.476-201ENST00000384347 108 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AL096829.1-201ENST00000413677 457 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AL590806.1-201ENST00000415818 853 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AC009302.1-201ENST00000417147 390 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 BOLA3P4-201ENST00000418151 400 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 RPL7AP14-201ENST00000424041 802 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 ATP5JP1-201ENST00000431631 322 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AC002553.3-201ENST00000453002 341 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 BX248409.1-201ENST00000455497 255 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 RNU6-329P-201ENST00000459618 107 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 MEMO1P3-201ENST00000459811 302 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 MTATP8P1-201ENST00000467115 207 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AC010655.3-201ENST00000478818 450 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AC124945.1-201ENST00000485133 188 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AC138409.2-202ENST00000507274 458 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 KLHL2P1-201ENST00000508691 521 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 RN7SKP67-201ENST00000515905 235 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 RNU6-1314P-201ENST00000517139 104 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AC068587.4-201ENST00000533893 186 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AC063950.1-201ENST00000552036 308 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AP001180.3-201ENST00000582221 145 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AL133338.2-201ENST00000604292 736 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AP001330.4-201ENST00000604350 154 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 U4.1-201ENST00000620349 87 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AL133216.2-202ENST00000634512 349 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AC104966.1-201ENST00000467010 1464 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 AC022164.1-201ENST00000568767 2673 ntBASIC5.51□□□□□ -1.53
ATG4DQ86TL0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 AC025574.1-201ENST00000554784 1653 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 AC092447.10-201ENST00000620607 1652 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 OR11H4-201ENST00000315409 1082 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 RPL7P26-201ENST00000333817 754 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 RNU6-492P-201ENST00000363035 104 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 SNORA63.7-201ENST00000365579 123 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 SUGT1P1-201ENST00000379514 476 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 Y_RNA.395-201ENST00000383945 109 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 RNU6-1297P-201ENST00000384415 104 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 RNU6-1158P-201ENST00000391167 107 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 RNU6-1304P-201ENST00000411374 106 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 AC127391.1-201ENST00000411737 98 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 RPL35AP31-201ENST00000418340 337 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 AC130360.1-201ENST00000425489 1117 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 RPEP2-201ENST00000432149 701 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 AL627308.1-201ENST00000435693 821 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 RPL7P29-201ENST00000437151 728 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 RPL5P7-201ENST00000444235 813 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 RNU6-261P-201ENST00000459506 102 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 AC108693.1-201ENST00000496068 432 ntBASIC5.5□□□□□ -1.53
ATG4DQ86TL0 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.5□□□□□ -1.53
ATG4DQ86TL0 PCBP2P3-201ENST00000509726 843 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms