Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 AL603865.2-201ENST00000401679 213 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 BTBD10P2-201ENST00000404779 676 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 MIR1250-201ENST00000408098 113 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 CEACAMP8-201ENST00000413902 580 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 AC234779.1-201ENST00000425910 285 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 UBE2V1P1-201ENST00000430836 445 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 RPL36AP15-201ENST00000444514 266 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 AC005002.1-201ENST00000447458 540 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 snoU109.3-201ENST00000459477 145 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 RPL23AP37-201ENST00000479658 549 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 AC073522.1-201ENST00000483312 377 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 AC108145.1-201ENST00000503770 153 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 PRELID3BP6-201ENST00000503839 571 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 TPT1P8-201ENST00000510120 555 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 ZNF971P-201ENST00000562068 1249 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 AC245884.10-201ENST00000597355 337 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 AC069431.2-201ENST00000604149 1099 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 COX6CP4-201ENST00000605798 228 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 AC084824.4-201ENST00000620106 731 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 AC140113.4-201ENST00000622087 222 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 ZNF137P-201ENST00000456718 1920 ntBASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NUP54Q7Z3B4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 AC079741.1-201ENST00000321498 212 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 RNVU1-6-201ENST00000364688 164 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 SNORA71.2-201ENST00000364941 134 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 EIF5P1-201ENST00000400019 1231 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 RNU6-77P-201ENST00000410554 91 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 RN7SKP106-201ENST00000410832 272 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 OR51B3P-201ENST00000412287 913 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 AL590139.1-201ENST00000416267 400 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 USP9YP21-201ENST00000420603 432 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 FAR2P4-202ENST00000425399 584 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 OR4F13P-201ENST00000428478 931 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 RPL23AP33-201ENST00000442301 452 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 RPS26P30-201ENST00000443431 335 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 TDGF1P1-201ENST00000445734 527 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 AC073587.1-201ENST00000447093 876 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 FGF7P3-201ENST00000454645 303 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 BX248409.1-201ENST00000455497 255 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 RPL7P32-201ENST00000457119 744 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 RNU7-140P-201ENST00000459546 60 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 VWA8P1-201ENST00000510889 176 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 CDH12P4-201ENST00000517835 295 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 CDH12P3-201ENST00000517935 295 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 CDH12P1-201ENST00000518435 295 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 OR5M2P-201ENST00000529003 936 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 TOMM20P2-201ENST00000540082 421 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 CYP2C60P-201ENST00000566088 139 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 RN7SL690P-201ENST00000582087 240 ntBASIC4.29□□□□□ -1.72
NUP54Q7Z3B4 AC090330.1-201ENST00000588646 764 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms