Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHFQ7M4L6 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SHFQ7M4L6 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHFQ7M4L6 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.3□□□□□ -1.72
SHFQ7M4L6 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SHFQ7M4L6 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHFQ7M4L6 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 SGO1P2-201ENST00000429458 1589 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHFQ7M4L6 OR56B2P-201ENST00000317102 954 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHFQ7M4L6 SNORD116-23-201ENST00000384645 92 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 MIR195-201ENST00000385194 87 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 LAP3P1-201ENST00000403648 294 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 AL139098.1-201ENST00000407291 389 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 RNA5SP345-201ENST00000410646 108 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 AL450992.3-201ENST00000413192 568 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC019050.1-201ENST00000418508 492 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC090960.1-201ENST00000421072 306 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 OR2AM1P-201ENST00000422137 422 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 AL593851.1-201ENST00000426171 157 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHFQ7M4L6 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 YWHAZP7-201ENST00000436906 631 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 AL445567.1-201ENST00000439121 144 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 RPS27AP15-201ENST00000447672 466 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC010468.1-201ENST00000461022 817 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 GAPDHP36-201ENST00000480688 918 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 RPL7AP10-201ENST00000481016 791 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC079841.1-201ENST00000481228 950 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC072052.1-201ENST00000496556 306 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 HMGB3P13-201ENST00000511263 607 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 ATP5LP3-201ENST00000514223 304 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 RN7SKP31-201ENST00000516354 278 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC022832.1-201ENST00000530718 645 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 AL356057.1-201ENST00000533798 831 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC092490.3-201ENST00000545370 572 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 GTF2IP8-201ENST00000560687 584 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC011445.2-201ENST00000599274 173 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC010620.1-201ENST00000601088 1102 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 VIS1.1-201ENST00000610517 203 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 AL392048.1-201ENST00000613946 534 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC090246.1-201ENST00000616499 426 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC009318.3-201ENST00000616916 503 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 AL603755.1-201ENST00000619504 163 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC004943.3-201ENST00000624116 600 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC116618.1-201ENST00000634617 774 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 AC007671.2-201ENST00000637344 619 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.29□□□□□ -1.72
SHFQ7M4L6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHFQ7M4L6 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHFQ7M4L6 AL049737.1-201ENST00000413920 1403 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.29□□□□□ -1.72
SHFQ7M4L6 SMG1P6-201ENST00000532337 2930 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 AP000526.1-201ENST00000603308 1388 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHFQ7M4L6 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHFQ7M4L6 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SHFQ7M4L6 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHFQ7M4L6 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHFQ7M4L6 RNU4-4P-201ENST00000364588 130 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 RNU6-1300P-201ENST00000391046 108 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 AL160275.2-201ENST00000412010 394 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 GSTM3P2-201ENST00000412746 530 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 RPL21P108-201ENST00000413857 481 ntBASIC4.28□□□□□ -1.72
SHFQ7M4L6 ATG4AP1-201ENST00000416893 538 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms