Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 OR4H6P-201ENST00000563771 921 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 RN7SL199P-201ENST00000578752 281 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 RN7SL656P-201ENST00000579044 281 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 RN7SL230P-201ENST00000580835 303 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 RN7SL404P-201ENST00000582421 281 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AL499605.1-201ENST00000604628 403 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AC011891.2-201ENST00000604949 397 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AP004247.3-201ENST00000608682 624 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 uc_338.15-201ENST00000615470 191 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AC099654.6-201ENST00000636487 512 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AL161912.4-201ENST00000623889 2468 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 GUCY1B2-204ENST00000531898 1979 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AC062022.1-201ENST00000451026 1684 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AC011493.1-201ENST00000596753 1632 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 SNORA38B-201ENST00000363524 131 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 RNU6-289P-201ENST00000364093 107 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 RN7SKP269-201ENST00000365545 319 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 RNU1-46P-201ENST00000384425 164 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 MIR323B-201ENST00000385269 82 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 AC092642.1-201ENST00000392417 425 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 AL121972.1-201ENST00000402023 252 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 AL121835.1-201ENST00000404250 354 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 MIR320C1-201ENST00000408566 88 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 AL354868.1-201ENST00000417077 482 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 AL590609.2-201ENST00000421430 368 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 GAPDHP37-201ENST00000442317 968 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 MGAT2P1-201ENST00000449718 797 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 SBDSP1-204ENST00000453858 737 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 AL445687.2-201ENST00000458156 728 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 Y_RNA.635-201ENST00000459041 101 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 AC114728.1-201ENST00000488289 483 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 AC024558.1-201ENST00000505008 528 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 AC025674.1-201ENST00000507074 324 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 RNU6-764P-201ENST00000516396 105 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 AC025857.2-201ENST00000602711 238 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 AC007255.2-201ENST00000604053 631 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 AC245389.1-201ENST00000605141 529 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 AC022893.3-201ENST00000607665 437 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 AL591926.1-201ENST00000620542 217 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
FOXR1Q6PIV2 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 Y_RNA.112-201ENST00000363250 102 ntBASIC6.56□□□□□ -1.36
FOXR1Q6PIV2 Y_RNA.176-201ENST00000363815 109 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms