Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.85□□□□□ -1.63
CTR9Q6PD62 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.85□□□□□ -1.63
CTR9Q6PD62 CYP4A43P-201ENST00000568156 121 ntBASIC4.85□□□□□ -1.63
CTR9Q6PD62 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.85□□□□□ -1.63
CTR9Q6PD62 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CTR9Q6PD62 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.85□□□□□ -1.63
CTR9Q6PD62 AL450270.1-201ENST00000606160 391 ntBASIC4.85□□□□□ -1.63
CTR9Q6PD62 MIR432-201ENST00000606207 94 ntBASIC4.85□□□□□ -1.63
CTR9Q6PD62 AC135803.1-201ENST00000608748 565 ntBASIC4.85□□□□□ -1.63
CTR9Q6PD62 AC004241.3-201ENST00000611728 517 ntBASIC4.85□□□□□ -1.63
CTR9Q6PD62 AL512506.1-201ENST00000613918 449 ntBASIC4.85□□□□□ -1.63
CTR9Q6PD62 AC090246.1-201ENST00000616499 426 ntBASIC4.85□□□□□ -1.63
CTR9Q6PD62 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.85□□□□□ -1.63
CTR9Q6PD62 MARK2P15-201ENST00000432204 2186 ntBASIC4.85□□□□□ -1.63
CTR9Q6PD62 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTR9Q6PD62 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTR9Q6PD62 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTR9Q6PD62 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTR9Q6PD62 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CTR9Q6PD62 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTR9Q6PD62 AC110792.3-201ENST00000595906 1614 ntBASIC4.84□□□□□ -1.63
CTR9Q6PD62 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTR9Q6PD62 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTR9Q6PD62 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTR9Q6PD62 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.84□□□□□ -1.63
CTR9Q6PD62 SNORD115-48-201ENST00000364764 76 ntBASIC4.84□□□□□ -1.63
CTR9Q6PD62 RNU6-146P-201ENST00000384602 108 ntBASIC4.84□□□□□ -1.63
CTR9Q6PD62 MT-TP-201ENST00000387461 68 ntBASIC4.84□□□□□ -1.63
CTR9Q6PD62 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.84□□□□□ -1.63
CTR9Q6PD62 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTR9Q6PD62 RNU4-6P-201ENST00000410804 122 ntBASIC4.84□□□□□ -1.63
CTR9Q6PD62 BTF3P9-201ENST00000418784 283 ntBASIC4.84□□□□□ -1.63
CTR9Q6PD62 ELOCP8-201ENST00000439309 332 ntBASIC4.84□□□□□ -1.63
CTR9Q6PD62 ELOCP15-201ENST00000442090 332 ntBASIC4.84□□□□□ -1.63
CTR9Q6PD62 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.84□□□□□ -1.63
CTR9Q6PD62 RAD23BP3-201ENST00000454157 1152 ntBASIC4.84□□□□□ -1.63
CTR9Q6PD62 MTND2P30-201ENST00000456663 382 ntBASIC4.84□□□□□ -1.63
CTR9Q6PD62 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.84□□□□□ -1.63
CTR9Q6PD62 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.84□□□□□ -1.63
CTR9Q6PD62 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.84□□□□□ -1.63
CTR9Q6PD62 HMGB1P46-201ENST00000520062 610 ntBASIC4.84□□□□□ -1.63
CTR9Q6PD62 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.84□□□□□ -1.63
CTR9Q6PD62 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.84□□□□□ -1.63
CTR9Q6PD62 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.84□□□□□ -1.63
CTR9Q6PD62 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.84□□□□□ -1.63
CTR9Q6PD62 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.84□□□□□ -1.63
CTR9Q6PD62 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.84□□□□□ -1.63
CTR9Q6PD62 AC106785.1-201ENST00000565935 262 ntBASIC4.84□□□□□ -1.63
CTR9Q6PD62 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.84□□□□□ -1.63
CTR9Q6PD62 AC141257.3-201ENST00000572906 215 ntBASIC4.84□□□□□ -1.63
CTR9Q6PD62 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.84□□□□□ -1.63
CTR9Q6PD62 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.84□□□□□ -1.63
CTR9Q6PD62 AC110743.1-201ENST00000584870 478 ntBASIC4.84□□□□□ -1.63
CTR9Q6PD62 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.84□□□□□ -1.63
CTR9Q6PD62 AC019131.2-201ENST00000609071 870 ntBASIC4.84□□□□□ -1.63
CTR9Q6PD62 MIR6868-201ENST00000611215 58 ntBASIC4.84□□□□□ -1.63
CTR9Q6PD62 MIR7702-201ENST00000621931 59 ntBASIC4.84□□□□□ -1.63
CTR9Q6PD62 AP006248.3-201ENST00000623580 594 ntBASIC4.84□□□□□ -1.63
CTR9Q6PD62 RPL23AP61-201ENST00000623642 466 ntBASIC4.84□□□□□ -1.63
CTR9Q6PD62 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTR9Q6PD62 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTR9Q6PD62 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CTR9Q6PD62 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CTR9Q6PD62 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTR9Q6PD62 MTND4P10-201ENST00000446199 1363 ntBASIC4.83□□□□□ -1.64
CTR9Q6PD62 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.83□□□□□ -1.64
CTR9Q6PD62 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTR9Q6PD62 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTR9Q6PD62 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CTR9Q6PD62 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CTR9Q6PD62 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTR9Q6PD62 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
CTR9Q6PD62 RNU6-628P-201ENST00000410675 107 ntBASIC4.83□□□□□ -1.64
CTR9Q6PD62 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.83□□□□□ -1.64
CTR9Q6PD62 OR8F1P-201ENST00000425243 930 ntBASIC4.83□□□□□ -1.64
CTR9Q6PD62 FTH1P6-201ENST00000430768 320 ntBASIC4.83□□□□□ -1.64
CTR9Q6PD62 MTND2P2-201ENST00000434633 945 ntBASIC4.83□□□□□ -1.64
CTR9Q6PD62 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.83□□□□□ -1.64
CTR9Q6PD62 AC093716.1-201ENST00000435923 377 ntBASIC4.83□□□□□ -1.64
CTR9Q6PD62 MTCYBP29-201ENST00000436327 1006 ntBASIC4.83□□□□□ -1.64
CTR9Q6PD62 HLA-N-201ENST00000437516 135 ntBASIC4.83□□□□□ -1.64
CTR9Q6PD62 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CTR9Q6PD62 AL354710.1-201ENST00000453641 246 ntBASIC4.83□□□□□ -1.64
CTR9Q6PD62 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.83□□□□□ -1.64
CTR9Q6PD62 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.83□□□□□ -1.64
CTR9Q6PD62 CABYRP1-201ENST00000465493 1045 ntBASIC4.83□□□□□ -1.64
CTR9Q6PD62 MTND3P24-201ENST00000506306 329 ntBASIC4.83□□□□□ -1.64
CTR9Q6PD62 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.83□□□□□ -1.64
CTR9Q6PD62 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CTR9Q6PD62 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.83□□□□□ -1.64
CTR9Q6PD62 AC007599.1-201ENST00000568688 1174 ntBASIC4.83□□□□□ -1.64
CTR9Q6PD62 MTCO3P22-201ENST00000603219 784 ntBASIC4.83□□□□□ -1.64
CTR9Q6PD62 AC123786.2-201ENST00000603459 275 ntBASIC4.83□□□□□ -1.64
CTR9Q6PD62 AL671309.1-201ENST00000603750 544 ntBASIC4.83□□□□□ -1.64
CTR9Q6PD62 AC010680.3-201ENST00000604215 520 ntBASIC4.83□□□□□ -1.64
CTR9Q6PD62 MIR6875-201ENST00000617506 72 ntBASIC4.83□□□□□ -1.64
CTR9Q6PD62 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
CTR9Q6PD62 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.83□□□□□ -1.64
CTR9Q6PD62 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.83□□□□□ -1.64
CTR9Q6PD62 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms