Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 AL133412.1-201ENST00000380194 2992 ntBASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
H3F3CQ6NXT2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 MIR7-1-201ENST00000384871 110 ntBASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 RPL36AP36-201ENST00000418616 301 ntBASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 MTCO1P52-201ENST00000433928 531 ntBASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 RPL23AP89-201ENST00000439324 255 ntBASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 CDC27P1-201ENST00000445384 715 ntBASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 HMGB1P16-201ENST00000447155 540 ntBASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 AL359073.1-201ENST00000448036 403 ntBASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 AGGF1P6-201ENST00000569213 976 ntBASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 AC005255.1-201ENST00000593748 216 ntBASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 AC233309.1-201ENST00000619522 751 ntBASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 AP005264.7-201ENST00000625003 745 ntBASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 CDRT1-208ENST00000630868 794 ntBASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 AC018555.1-201ENST00000567548 1980 ntBASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
H3F3CQ6NXT2 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 AC083899.2-201ENST00000423285 1376 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 RNU6-452P-201ENST00000384406 107 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 HSPE1P12-201ENST00000412576 301 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 JKAMPP1-201ENST00000413804 919 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 AC114814.2-201ENST00000419195 485 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 AL356806.1-201ENST00000422524 916 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 ELOCP6-201ENST00000429066 328 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 PRELID3BP10-201ENST00000431957 584 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 AC122718.1-201ENST00000439448 744 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 MED6P1-201ENST00000439659 713 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 AL353093.1-201ENST00000441292 436 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 RAD23BP3-201ENST00000454157 1152 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 SNRPGP5-201ENST00000456003 220 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 ELOCP12-201ENST00000458706 328 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 FAM133DP-201ENST00000464802 691 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 RPL23AP71-201ENST00000470966 469 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 FTH1P24-201ENST00000503502 462 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 AC010460.1-201ENST00000507087 466 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 RN7SKP82-201ENST00000516786 223 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 UBTFL9-201ENST00000534504 1148 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 AC007424.1-203ENST00000554613 687 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 AL031666.3-201ENST00000609320 1006 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 MIR6875-201ENST00000617506 72 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 AC138907.10-201ENST00000623708 983 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 MAPK10-253ENST00000641010 4072 ntBASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
H3F3CQ6NXT2 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms