Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC93Q567U6 AC117522.2-201ENST00000510049 657 ntBASIC5.72□□□□□ -1.49
CCDC93Q567U6 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.72□□□□□ -1.49
CCDC93Q567U6 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.72□□□□□ -1.49
CCDC93Q567U6 AP000827.1-201ENST00000527814 258 ntBASIC5.72□□□□□ -1.49
CCDC93Q567U6 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC93Q567U6 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.72□□□□□ -1.49
CCDC93Q567U6 AC093591.2-201ENST00000565254 3843 ntBASIC5.72□□□□□ -1.49
CCDC93Q567U6 AC040904.1-201ENST00000590850 223 ntBASIC5.72□□□□□ -1.49
CCDC93Q567U6 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC93Q567U6 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC93Q567U6 AC010200.2-201ENST00000605098 235 ntBASIC5.72□□□□□ -1.49
CCDC93Q567U6 AC064807.4-201ENST00000607201 407 ntBASIC5.72□□□□□ -1.49
CCDC93Q567U6 AL023881.1-201ENST00000621088 301 ntBASIC5.72□□□□□ -1.49
CCDC93Q567U6 LINC01808-202ENST00000641680 1116 ntBASIC5.72□□□□□ -1.49
CCDC93Q567U6 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.72□□□□□ -1.49
CCDC93Q567U6 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC93Q567U6 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC93Q567U6 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CCDC93Q567U6 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC93Q567U6 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CCDC93Q567U6 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.72□□□□□ -1.49
CCDC93Q567U6 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC93Q567U6 DDX18P3-201ENST00000404856 2007 ntBASIC5.72□□□□□ -1.49
CCDC93Q567U6 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.72□□□□□ -1.49
CCDC93Q567U6 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.71□□□□□ -1.49
CCDC93Q567U6 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CCDC93Q567U6 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC93Q567U6 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC93Q567U6 RNU6-185P-201ENST00000384421 107 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 MIR659-201ENST00000384963 97 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 AL590762.2-201ENST00000395798 571 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 TXNL1P1-201ENST00000429528 554 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 RPS20P1-201ENST00000434853 354 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 OR4C10P-201ENST00000434991 931 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 NANOGP2-201ENST00000435391 727 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 RPL12P46-201ENST00000436610 195 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 RPL35AP21-201ENST00000437667 333 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC93Q567U6 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC93Q567U6 Z95327.1-201ENST00000446082 482 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC93Q567U6 AC034236.1-201ENST00000469891 373 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 UQCRHP4-201ENST00000471686 272 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 AC005912.1-201ENST00000495392 255 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC93Q567U6 DEFB130C-202ENST00000530001 230 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 AC135279.1-201ENST00000543493 504 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 NPM1P47-201ENST00000560843 856 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC93Q567U6 AC018552.3-201ENST00000567416 561 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.71□□□□□ -1.5
CCDC93Q567U6 AC245389.1-201ENST00000605141 529 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 AC090948.2-201ENST00000607363 564 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.71□□□□□ -1.5
CCDC93Q567U6 RNA5SP196-201ENST00000625967 102 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CCDC93Q567U6 AC009643.2-201ENST00000603543 1448 ntBASIC5.71□□□□□ -1.5
CCDC93Q567U6 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CCDC93Q567U6 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.71□□□□□ -1.5
CCDC93Q567U6 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
CCDC93Q567U6 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC93Q567U6 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC93Q567U6 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC93Q567U6 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC93Q567U6 MTND5P31-201ENST00000419366 1374 ntBASIC5.7□□□□□ -1.5
CCDC93Q567U6 ASNSP1-201ENST00000518311 1939 ntBASIC5.7□□□□□ -1.5
CCDC93Q567U6 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC93Q567U6 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.7□□□□□ -1.5
CCDC93Q567U6 METTL21EP-201ENST00000298105 713 ntBASIC5.7□□□□□ -1.5
CCDC93Q567U6 SNORD116-8-201ENST00000384365 95 ntBASIC5.7□□□□□ -1.5
CCDC93Q567U6 HMGB3P18-201ENST00000406327 590 ntBASIC5.7□□□□□ -1.5
CCDC93Q567U6 FCF1P5-201ENST00000406490 482 ntBASIC5.7□□□□□ -1.5
CCDC93Q567U6 RPL23AP26-201ENST00000412728 464 ntBASIC5.7□□□□□ -1.5
CCDC93Q567U6 TMSB10P2-201ENST00000416049 131 ntBASIC5.7□□□□□ -1.5
CCDC93Q567U6 AL356320.2-201ENST00000417263 507 ntBASIC5.7□□□□□ -1.5
CCDC93Q567U6 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC93Q567U6 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.7□□□□□ -1.5
CCDC93Q567U6 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC93Q567U6 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC93Q567U6 MTCYBP42-201ENST00000444653 1130 ntBASIC5.7□□□□□ -1.5
CCDC93Q567U6 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CCDC93Q567U6 AC105137.1-201ENST00000484355 562 ntBASIC5.7□□□□□ -1.5
CCDC93Q567U6 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC93Q567U6 AC034244.1-201ENST00000507687 207 ntBASIC5.7□□□□□ -1.5
CCDC93Q567U6 SNORA3.4-201ENST00000515969 96 ntBASIC5.7□□□□□ -1.5
CCDC93Q567U6 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC93Q567U6 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC93Q567U6 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CCDC93Q567U6 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.7□□□□□ -1.5
CCDC93Q567U6 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC93Q567U6 AC023813.2-201ENST00000564321 469 ntBASIC5.7□□□□□ -1.5
CCDC93Q567U6 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC93Q567U6 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.7□□□□□ -1.5
CCDC93Q567U6 MTND4LP24-201ENST00000572277 291 ntBASIC5.7□□□□□ -1.5
CCDC93Q567U6 MIR4429-201ENST00000580105 73 ntBASIC5.7□□□□□ -1.5
CCDC93Q567U6 AC233702.9-201ENST00000581528 203 ntBASIC5.7□□□□□ -1.5
CCDC93Q567U6 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CCDC93Q567U6 AC091057.2-201ENST00000602594 792 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms