Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 RPL7P55-201ENST00000450522 746 ntBASIC4.89□□□□□ -1.63
PDS5AQ29RF7 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 AC020593.1-201ENST00000507399 299 ntBASIC4.89□□□□□ -1.63
PDS5AQ29RF7 NPM1P41-201ENST00000512920 831 ntBASIC4.89□□□□□ -1.63
PDS5AQ29RF7 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.89□□□□□ -1.63
PDS5AQ29RF7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 AC007599.1-201ENST00000568688 1174 ntBASIC4.89□□□□□ -1.63
PDS5AQ29RF7 AC025627.2-201ENST00000576220 160 ntBASIC4.89□□□□□ -1.63
PDS5AQ29RF7 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 AL669942.2-201ENST00000620352 697 ntBASIC4.89□□□□□ -1.63
PDS5AQ29RF7 AC092159.4-201ENST00000624944 550 ntBASIC4.89□□□□□ -1.63
PDS5AQ29RF7 AC005332.5-201ENST00000591222 2919 ntBASIC4.89□□□□□ -1.63
PDS5AQ29RF7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.89□□□□□ -1.63
PDS5AQ29RF7 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
PDS5AQ29RF7 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDS5AQ29RF7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.88□□□□□ -1.63
PDS5AQ29RF7 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDS5AQ29RF7 LINC01109-201ENST00000603837 3081 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.88□□□□□ -1.63
PDS5AQ29RF7 RNU6-354P-201ENST00000383862 107 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 RNU6-610P-201ENST00000384264 107 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AL121834.1-202ENST00000404494 277 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AC114973.1-201ENST00000429057 632 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 TBCAP1-201ENST00000436520 327 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AC006994.1-201ENST00000438212 839 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AL353898.1-201ENST00000444055 238 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 RPS11P1-201ENST00000451072 473 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 FABP3P2-201ENST00000453169 399 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 snoU109.3-201ENST00000459477 145 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 RPL23AP2-201ENST00000471227 466 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AC091959.2-201ENST00000477363 321 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AC104982.1-201ENST00000478775 574 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AC006517.1-201ENST00000480485 328 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 OR5H3P-201ENST00000502817 919 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 PRELID3BP6-201ENST00000503839 571 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC4.88□□□□□ -1.63
PDS5AQ29RF7 PPBPP1-201ENST00000510807 373 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.88□□□□□ -1.63
PDS5AQ29RF7 NDUFA5P2-201ENST00000519723 344 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.88□□□□□ -1.63
PDS5AQ29RF7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
PDS5AQ29RF7 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AC022968.1-201ENST00000567372 442 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 RPL23AP87-202ENST00000573039 466 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 CBX3P2-202ENST00000583365 535 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AC008507.2-201ENST00000588402 1176 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AL592436.1-201ENST00000605135 558 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AL031666.3-201ENST00000609320 1006 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AC124016.2-201ENST00000610058 665 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AL159169.2-201ENST00000610061 1269 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AC126544.2-201ENST00000625174 749 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AC006927.4-201ENST00000639187 543 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 AC013437.2-201ENST00000639587 677 ntBASIC4.88□□□□□ -1.63
PDS5AQ29RF7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PDS5AQ29RF7 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
PDS5AQ29RF7 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.87□□□□□ -1.63
PDS5AQ29RF7 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDS5AQ29RF7 AC245100.2-201ENST00000454544 1679 ntBASIC4.87□□□□□ -1.63
PDS5AQ29RF7 AC008432.1-201ENST00000615912 1320 ntBASIC4.87□□□□□ -1.63
PDS5AQ29RF7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDS5AQ29RF7 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PDS5AQ29RF7 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.87□□□□□ -1.63
PDS5AQ29RF7 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PDS5AQ29RF7 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDS5AQ29RF7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDS5AQ29RF7 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDS5AQ29RF7 RN7SKP159-201ENST00000410657 292 ntBASIC4.87□□□□□ -1.63
PDS5AQ29RF7 RPL26P37-201ENST00000411983 438 ntBASIC4.87□□□□□ -1.63
PDS5AQ29RF7 MTCYBP7-201ENST00000419540 1134 ntBASIC4.87□□□□□ -1.63
PDS5AQ29RF7 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.87□□□□□ -1.63
PDS5AQ29RF7 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.87□□□□□ -1.63
PDS5AQ29RF7 HMGB3P5-201ENST00000428894 612 ntBASIC4.87□□□□□ -1.63
PDS5AQ29RF7 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.87□□□□□ -1.63
PDS5AQ29RF7 HMGB1P26-201ENST00000452520 628 ntBASIC4.87□□□□□ -1.63
PDS5AQ29RF7 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.87□□□□□ -1.63
PDS5AQ29RF7 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.87□□□□□ -1.63
PDS5AQ29RF7 MTND2P32-201ENST00000521584 1038 ntBASIC4.87□□□□□ -1.63
PDS5AQ29RF7 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.87□□□□□ -1.63
PDS5AQ29RF7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.87□□□□□ -1.63
PDS5AQ29RF7 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.87□□□□□ -1.63
PDS5AQ29RF7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.87□□□□□ -1.63
PDS5AQ29RF7 AC104229.1-201ENST00000561364 255 ntBASIC4.87□□□□□ -1.63
PDS5AQ29RF7 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.87□□□□□ -1.63
PDS5AQ29RF7 AC012417.1-201ENST00000582307 1039 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms