Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 RNY3P10-201ENST00000384764 102 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NKX6-1P78426 MIR550A3-201ENST00000390735 95 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 SSXP10-201ENST00000402595 565 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 RN7SKP213-201ENST00000410746 298 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 AC079809.1-201ENST00000415468 276 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 MTCO2P34-201ENST00000421994 607 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 AL512649.1-201ENST00000428997 581 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.89□□□□□ -1.63
NKX6-1P78426 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.89□□□□□ -1.63
NKX6-1P78426 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX6-1P78426 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.89□□□□□ -1.63
NKX6-1P78426 AC138761.5-201ENST00000433967 325 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 NPM1P18-201ENST00000434232 732 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 RPS20P1-201ENST00000434853 354 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX6-1P78426 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.89□□□□□ -1.63
NKX6-1P78426 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX6-1P78426 CEACAMP7-201ENST00000444105 496 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 H2AFZP6-201ENST00000444403 394 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 COX6CP12-201ENST00000446748 202 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 EEF1E1P1-201ENST00000446998 430 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX6-1P78426 RPSAP50-201ENST00000481955 852 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 DUTP1-201ENST00000493631 470 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 LAMTOR3P2-201ENST00000504479 232 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.89□□□□□ -1.63
NKX6-1P78426 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX6-1P78426 AC116347.2-201ENST00000514912 523 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.89□□□□□ -1.63
NKX6-1P78426 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX6-1P78426 AP003033.1-201ENST00000527244 415 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.89□□□□□ -1.63
NKX6-1P78426 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX6-1P78426 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX6-1P78426 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.89□□□□□ -1.63
NKX6-1P78426 MIR3611-201ENST00000584484 83 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX6-1P78426 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX6-1P78426 AC087752.4-201ENST00000605911 462 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.89□□□□□ -1.63
NKX6-1P78426 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX6-1P78426 AC068870.2-201ENST00000620635 389 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX6-1P78426 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX6-1P78426 U6.101-201ENST00000637707 76 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX6-1P78426 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
NKX6-1P78426 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.89□□□□□ -1.63
NKX6-1P78426 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
NKX6-1P78426 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
NKX6-1P78426 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NKX6-1P78426 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.89□□□□□ -1.63
NKX6-1P78426 AL353796.1-201ENST00000561542 3241 ntBASIC4.89□□□□□ -1.63
NKX6-1P78426 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
NKX6-1P78426 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX6-1P78426 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX6-1P78426 SMG1P4-204ENST00000523028 4131 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX6-1P78426 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX6-1P78426 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX6-1P78426 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX6-1P78426 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX6-1P78426 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
NKX6-1P78426 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX6-1P78426 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX6-1P78426 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX6-1P78426 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
NKX6-1P78426 SNORA51.6-201ENST00000384151 125 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 AL121972.1-201ENST00000402023 252 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 HMGB1P17-201ENST00000403495 628 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 OR8G2P-201ENST00000412796 908 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.88□□□□□ -1.63
NKX6-1P78426 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.88□□□□□ -1.63
NKX6-1P78426 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.88□□□□□ -1.63
NKX6-1P78426 AC006366.1-201ENST00000422002 759 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX6-1P78426 AL133173.1-201ENST00000423458 397 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 CENPIP1-201ENST00000425713 902 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX6-1P78426 AL365184.2-201ENST00000431139 435 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX6-1P78426 RPL23AP74-201ENST00000437246 471 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 MTCO1P19-201ENST00000443487 500 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.88□□□□□ -1.63
NKX6-1P78426 ARPC3P5-201ENST00000448802 534 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX6-1P78426 VN1R32P-201ENST00000452234 905 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 MEMO1P4-201ENST00000453590 386 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NKX6-1P78426 RPL7P22-201ENST00000466005 733 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 RN7SL860P-201ENST00000473738 223 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX6-1P78426 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX6-1P78426 RN7SL808P-201ENST00000496066 299 ntBASIC4.88□□□□□ -1.63
NKX6-1P78426 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.88□□□□□ -1.63
NKX6-1P78426 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.88□□□□□ -1.63
NKX6-1P78426 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX6-1P78426 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.88□□□□□ -1.63
NKX6-1P78426 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms