Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RNA5SP443-201ENST00000363083 132 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 RNU6-213P-201ENST00000384051 104 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 SNORA11B-201ENST00000408175 129 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.37□□□□□ -1.87
HIST1H3AP68431 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.37□□□□□ -1.87
HIST1H3AP68431 AC092832.1-201ENST00000422934 400 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.37□□□□□ -1.87
HIST1H3AP68431 RPL30P3-201ENST00000424262 333 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 IFNNP1-201ENST00000429219 553 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.37□□□□□ -1.87
HIST1H3AP68431 OR4C10P-201ENST00000434991 931 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 AC092809.1-201ENST00000441469 474 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 RAB28P3-201ENST00000448325 597 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 AC018635.1-201ENST00000468292 1030 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 AC087385.1-201ENST00000475062 312 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 RPS4XP15-201ENST00000489210 795 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.37□□□□□ -1.87
HIST1H3AP68431 TPT1P3-201ENST00000492841 512 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 AC108941.1-201ENST00000502853 530 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 AC004069.2-201ENST00000505438 1114 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 USP9YP5-201ENST00000511770 630 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 FTH1P21-201ENST00000512179 511 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.37□□□□□ -1.87
HIST1H3AP68431 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.37□□□□□ -1.87
HIST1H3AP68431 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.37□□□□□ -1.87
HIST1H3AP68431 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.37□□□□□ -1.87
HIST1H3AP68431 AC136624.4-201ENST00000573044 370 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 AL137849.1-201ENST00000604767 169 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 AL049634.3-201ENST00000604968 457 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 AL592436.1-201ENST00000605135 558 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.37□□□□□ -1.87
HIST1H3AP68431 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.37□□□□□ -1.87
HIST1H3AP68431 MIR378J-201ENST00000611988 109 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HIST1H3AP68431 RNA5SP196-201ENST00000625967 102 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.37□□□□□ -1.87
HIST1H3AP68431 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.37□□□□□ -1.87
HIST1H3AP68431 EXOC5P1-201ENST00000510543 1969 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HIST1H3AP68431 LINC00561-201ENST00000565815 2738 ntBASIC3.37□□□□□ -1.87
HIST1H3AP68431 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.37□□□□□ -1.87
HIST1H3AP68431 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
HIST1H3AP68431 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HIST1H3AP68431 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HIST1H3AP68431 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HIST1H3AP68431 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.36□□□□□ -1.87
HIST1H3AP68431 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HIST1H3AP68431 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.36□□□□□ -1.87
HIST1H3AP68431 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.36□□□□□ -1.87
HIST1H3AP68431 HMGB1P32-201ENST00000425971 565 ntBASIC3.36□□□□□ -1.87
HIST1H3AP68431 RSL24D1P6-201ENST00000426934 401 ntBASIC3.36□□□□□ -1.87
HIST1H3AP68431 RPS26P40-201ENST00000435209 294 ntBASIC3.36□□□□□ -1.87
HIST1H3AP68431 AC009263.1-201ENST00000441193 1239 ntBASIC3.36□□□□□ -1.87
HIST1H3AP68431 HSFY6P-201ENST00000445573 403 ntBASIC3.36□□□□□ -1.87
HIST1H3AP68431 RN7SL93P-201ENST00000463035 293 ntBASIC3.36□□□□□ -1.87
HIST1H3AP68431 SEPT7P6-201ENST00000469999 1143 ntBASIC3.36□□□□□ -1.87
HIST1H3AP68431 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.36□□□□□ -1.87
HIST1H3AP68431 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.36□□□□□ -1.87
HIST1H3AP68431 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.36□□□□□ -1.87
HIST1H3AP68431 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.36□□□□□ -1.87
HIST1H3AP68431 TOMM20P2-201ENST00000540082 421 ntBASIC3.36□□□□□ -1.87
HIST1H3AP68431 AC092747.2-201ENST00000545069 983 ntBASIC3.36□□□□□ -1.87
HIST1H3AP68431 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
HIST1H3AP68431 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.36□□□□□ -1.87
HIST1H3AP68431 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.36□□□□□ -1.87
HIST1H3AP68431 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.36□□□□□ -1.87
HIST1H3AP68431 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.36□□□□□ -1.87
HIST1H3AP68431 Z82195.1-201ENST00000604558 398 ntBASIC3.36□□□□□ -1.87
HIST1H3AP68431 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.36□□□□□ -1.87
HIST1H3AP68431 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
HIST1H3AP68431 U7.8-201ENST00000619968 63 ntBASIC3.36□□□□□ -1.87
HIST1H3AP68431 MIR6500-201ENST00000622700 86 ntBASIC3.36□□□□□ -1.87
HIST1H3AP68431 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.36□□□□□ -1.87
HIST1H3AP68431 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HIST1H3AP68431 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HIST1H3AP68431 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HIST1H3AP68431 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HIST1H3AP68431 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.36□□□□□ -1.87
HIST1H3AP68431 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HIST1H3AP68431 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HIST1H3AP68431 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.35□□□□□ -1.87
HIST1H3AP68431 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HIST1H3AP68431 AC015813.6-201ENST00000624409 5808 ntBASIC3.35□□□□□ -1.87
HIST1H3AP68431 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HIST1H3AP68431 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.35□□□□□ -1.87
HIST1H3AP68431 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HIST1H3AP68431 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HIST1H3AP68431 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HIST1H3AP68431 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.35□□□□□ -1.87
HIST1H3AP68431 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HIST1H3AP68431 RNA5SP97-201ENST00000365006 84 ntBASIC3.35□□□□□ -1.87
HIST1H3AP68431 U1.1-201ENST00000384101 164 ntBASIC3.35□□□□□ -1.87
HIST1H3AP68431 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HIST1H3AP68431 AL049693.1-201ENST00000402760 611 ntBASIC3.35□□□□□ -1.87
HIST1H3AP68431 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.35□□□□□ -1.87
HIST1H3AP68431 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.35□□□□□ -1.87
HIST1H3AP68431 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.35□□□□□ -1.87
HIST1H3AP68431 TRGV6-201ENST00000417928 299 ntBASIC3.35□□□□□ -1.87
HIST1H3AP68431 OR8F1P-201ENST00000425243 930 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms