Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AP000843.1-201ENST00000624880 701 ntBASIC3.73□□□□□ -1.81
LMO4P61968 AC006065.6-201ENST00000625201 545 ntBASIC3.73□□□□□ -1.81
LMO4P61968 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.73□□□□□ -1.81
LMO4P61968 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
LMO4P61968 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LMO4P61968 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LMO4P61968 AL731566.1-201ENST00000620490 1937 ntBASIC3.73□□□□□ -1.81
LMO4P61968 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
LMO4P61968 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
LMO4P61968 AL355852.1-201ENST00000454081 1771 ntBASIC3.73□□□□□ -1.81
LMO4P61968 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
LMO4P61968 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.73□□□□□ -1.81
LMO4P61968 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
LMO4P61968 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LMO4P61968 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC3.73□□□□□ -1.81
LMO4P61968 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC3.73□□□□□ -1.81
LMO4P61968 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.73□□□□□ -1.81
LMO4P61968 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.72□□□□□ -1.81
LMO4P61968 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC3.72□□□□□ -1.81
LMO4P61968 AC006971.1-201ENST00000407916 4486 ntBASIC3.72□□□□□ -1.81
LMO4P61968 AL451142.2-201ENST00000429076 2090 ntBASIC3.72□□□□□ -1.81
LMO4P61968 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LMO4P61968 AC021755.1-201ENST00000559747 1447 ntBASIC3.72□□□□□ -1.81
LMO4P61968 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC3.72□□□□□ -1.81
LMO4P61968 METTL21EP-201ENST00000298105 713 ntBASIC3.72□□□□□ -1.81
LMO4P61968 OR56B2P-201ENST00000317102 954 ntBASIC3.72□□□□□ -1.81
LMO4P61968 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.72□□□□□ -1.81
LMO4P61968 Y_RNA.436-201ENST00000384097 102 ntBASIC3.72□□□□□ -1.81
LMO4P61968 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.72□□□□□ -1.81
LMO4P61968 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.72□□□□□ -1.81
LMO4P61968 AC008173.1-201ENST00000418901 264 ntBASIC3.72□□□□□ -1.81
LMO4P61968 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.72□□□□□ -1.81
LMO4P61968 RPL21P43-201ENST00000425440 472 ntBASIC3.72□□□□□ -1.81
LMO4P61968 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.72□□□□□ -1.81
LMO4P61968 NPM1P24-201ENST00000428039 894 ntBASIC3.72□□□□□ -1.81
LMO4P61968 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.72□□□□□ -1.81
LMO4P61968 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.72□□□□□ -1.81
LMO4P61968 PPIAP13-201ENST00000434706 478 ntBASIC3.72□□□□□ -1.81
LMO4P61968 RPL12P46-201ENST00000436610 195 ntBASIC3.72□□□□□ -1.81
LMO4P61968 GTF3AP5-201ENST00000442645 697 ntBASIC3.72□□□□□ -1.81
LMO4P61968 PHBP16-201ENST00000446318 950 ntBASIC3.72□□□□□ -1.81
LMO4P61968 MTCO2P7-201ENST00000446518 666 ntBASIC3.72□□□□□ -1.81
LMO4P61968 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.72□□□□□ -1.81
LMO4P61968 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.72□□□□□ -1.81
LMO4P61968 AC012671.1-201ENST00000451912 203 ntBASIC3.72□□□□□ -1.81
LMO4P61968 NUTF2P7-201ENST00000453086 375 ntBASIC3.72□□□□□ -1.81
LMO4P61968 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.72□□□□□ -1.81
LMO4P61968 CYCSP34-201ENST00000458172 304 ntBASIC3.72□□□□□ -1.81
LMO4P61968 RPL6P9-201ENST00000466502 859 ntBASIC3.72□□□□□ -1.81
LMO4P61968 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.72□□□□□ -1.81
LMO4P61968 AC126121.1-201ENST00000482313 553 ntBASIC3.72□□□□□ -1.81
LMO4P61968 CREM-238ENST00000488741 651 ntTSL 2 BASIC3.72□□□□□ -1.81
LMO4P61968 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.72□□□□□ -1.81
LMO4P61968 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.72□□□□□ -1.81
LMO4P61968 AL117351.2-201ENST00000513571 157 ntBASIC3.72□□□□□ -1.81
LMO4P61968 SNORA3.4-201ENST00000515969 96 ntBASIC3.72□□□□□ -1.81
LMO4P61968 RN7SKP21-201ENST00000516503 220 ntBASIC3.72□□□□□ -1.81
LMO4P61968 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.72□□□□□ -1.81
LMO4P61968 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.72□□□□□ -1.81
LMO4P61968 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.72□□□□□ -1.81
LMO4P61968 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LMO4P61968 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
LMO4P61968 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.72□□□□□ -1.81
LMO4P61968 PSMB7P1-201ENST00000556349 514 ntBASIC3.72□□□□□ -1.81
LMO4P61968 AL390334.1-201ENST00000556395 450 ntBASIC3.72□□□□□ -1.81
LMO4P61968 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.72□□□□□ -1.81
LMO4P61968 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.72□□□□□ -1.81
LMO4P61968 AC069366.1-201ENST00000583159 838 ntBASIC3.72□□□□□ -1.81
LMO4P61968 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.72□□□□□ -1.81
LMO4P61968 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.72□□□□□ -1.81
LMO4P61968 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.72□□□□□ -1.81
LMO4P61968 AL035411.2-201ENST00000604022 421 ntBASIC3.72□□□□□ -1.81
LMO4P61968 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.72□□□□□ -1.81
LMO4P61968 AC092653.1-201ENST00000608509 531 ntBASIC3.72□□□□□ -1.81
LMO4P61968 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LMO4P61968 AP000676.3-201ENST00000623299 569 ntBASIC3.72□□□□□ -1.81
LMO4P61968 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.72□□□□□ -1.81
LMO4P61968 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
LMO4P61968 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LMO4P61968 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.72□□□□□ -1.81
LMO4P61968 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LMO4P61968 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LMO4P61968 TCP11X1-202ENST00000622971 1372 ntBASIC3.72□□□□□ -1.81
LMO4P61968 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
LMO4P61968 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
LMO4P61968 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
LMO4P61968 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC3.72□□□□□ -1.81
LMO4P61968 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
LMO4P61968 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
LMO4P61968 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
LMO4P61968 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
LMO4P61968 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
LMO4P61968 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.71□□□□□ -1.82
LMO4P61968 AP000542.2-201ENST00000623199 6179 ntBASIC3.71□□□□□ -1.82
LMO4P61968 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LMO4P61968 SNORD56.4-201ENST00000363883 71 ntBASIC3.71□□□□□ -1.82
LMO4P61968 RN7SKP227-201ENST00000364445 330 ntBASIC3.71□□□□□ -1.82
LMO4P61968 UBBP2-201ENST00000376781 231 ntBASIC3.71□□□□□ -1.82
LMO4P61968 Y_RNA.505-201ENST00000384489 102 ntBASIC3.71□□□□□ -1.82
LMO4P61968 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms