Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.88□□□□□ -1.79
PKNOX1P55347 CBX3P2-202ENST00000583365 535 ntBASIC3.88□□□□□ -1.79
PKNOX1P55347 AC005242.1-201ENST00000585658 438 ntBASIC3.88□□□□□ -1.79
PKNOX1P55347 VN1R84P-201ENST00000593697 235 ntBASIC3.88□□□□□ -1.79
PKNOX1P55347 MIR7973-1-201ENST00000614683 76 ntBASIC3.88□□□□□ -1.79
PKNOX1P55347 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
PKNOX1P55347 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
PKNOX1P55347 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.87□□□□□ -1.79
PKNOX1P55347 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
PKNOX1P55347 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PKNOX1P55347 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PKNOX1P55347 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.87□□□□□ -1.79
PKNOX1P55347 AC053481.2-202ENST00000582394 1500 ntBASIC3.87□□□□□ -1.79
PKNOX1P55347 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PKNOX1P55347 OR11H4-201ENST00000315409 1082 ntBASIC3.87□□□□□ -1.79
PKNOX1P55347 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PKNOX1P55347 SNORD115-48-201ENST00000364764 76 ntBASIC3.87□□□□□ -1.79
PKNOX1P55347 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PKNOX1P55347 OR5BE1P-201ENST00000425977 939 ntBASIC3.87□□□□□ -1.79
PKNOX1P55347 DNAJC19P7-201ENST00000428811 344 ntBASIC3.87□□□□□ -1.79
PKNOX1P55347 HIGD1AP4-201ENST00000430194 280 ntBASIC3.87□□□□□ -1.79
PKNOX1P55347 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.87□□□□□ -1.79
PKNOX1P55347 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.87□□□□□ -1.79
PKNOX1P55347 AC083863.1-201ENST00000438811 231 ntBASIC3.87□□□□□ -1.79
PKNOX1P55347 EXTL2P1-201ENST00000446218 416 ntBASIC3.87□□□□□ -1.79
PKNOX1P55347 AL500522.2-201ENST00000448562 343 ntBASIC3.87□□□□□ -1.79
PKNOX1P55347 RN7SL93P-201ENST00000463035 293 ntBASIC3.87□□□□□ -1.79
PKNOX1P55347 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
PKNOX1P55347 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.87□□□□□ -1.79
PKNOX1P55347 RPL7P24-201ENST00000493052 752 ntBASIC3.87□□□□□ -1.79
PKNOX1P55347 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.87□□□□□ -1.79
PKNOX1P55347 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
PKNOX1P55347 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.87□□□□□ -1.79
PKNOX1P55347 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.87□□□□□ -1.79
PKNOX1P55347 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.87□□□□□ -1.79
PKNOX1P55347 TOMM20P2-201ENST00000540082 421 ntBASIC3.87□□□□□ -1.79
PKNOX1P55347 CKS1BP1-201ENST00000555221 240 ntBASIC3.87□□□□□ -1.79
PKNOX1P55347 AL109741.3-201ENST00000561748 592 ntBASIC3.87□□□□□ -1.79
PKNOX1P55347 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.87□□□□□ -1.79
PKNOX1P55347 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.87□□□□□ -1.79
PKNOX1P55347 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.87□□□□□ -1.79
PKNOX1P55347 IPO5P1-202ENST00000600039 287 ntBASIC3.87□□□□□ -1.79
PKNOX1P55347 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.87□□□□□ -1.79
PKNOX1P55347 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.87□□□□□ -1.79
PKNOX1P55347 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PKNOX1P55347 AL356490.1-201ENST00000623079 479 ntBASIC3.87□□□□□ -1.79
PKNOX1P55347 AC010608.2-201ENST00000624830 470 ntBASIC3.87□□□□□ -1.79
PKNOX1P55347 OR5BE1P-202ENST00000641168 1176 ntBASIC3.87□□□□□ -1.79
PKNOX1P55347 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PKNOX1P55347 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.87□□□□□ -1.79
PKNOX1P55347 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PKNOX1P55347 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PKNOX1P55347 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.87□□□□□ -1.79
PKNOX1P55347 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PKNOX1P55347 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PKNOX1P55347 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PKNOX1P55347 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PKNOX1P55347 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PKNOX1P55347 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.87□□□□□ -1.79
PKNOX1P55347 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PKNOX1P55347 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.86□□□□□ -1.79
PKNOX1P55347 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.86□□□□□ -1.79
PKNOX1P55347 XIAPP3-201ENST00000312918 795 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PKNOX1P55347 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
PKNOX1P55347 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PKNOX1P55347 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PKNOX1P55347 U3.22-201ENST00000391120 215 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 RNU11-4P-201ENST00000391149 133 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 AL353692.2-201ENST00000407054 335 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 RN7SKP33-201ENST00000410942 340 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 TPT1P2-201ENST00000413105 503 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 AC105402.1-201ENST00000413336 545 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.86□□□□□ -1.79
PKNOX1P55347 AC009480.2-201ENST00000422916 432 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 RPL23AP38-201ENST00000423801 469 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 RPS24P8-201ENST00000431490 402 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
PKNOX1P55347 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.86□□□□□ -1.79
PKNOX1P55347 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PKNOX1P55347 PPIAP17-201ENST00000438507 471 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.86□□□□□ -1.79
PKNOX1P55347 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.86□□□□□ -1.79
PKNOX1P55347 AL691517.1-201ENST00000440833 1235 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 EIF2S2P2-201ENST00000447161 982 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.86□□□□□ -1.79
PKNOX1P55347 CYCSP42-201ENST00000450823 238 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 RPS29P33-201ENST00000456717 146 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.86□□□□□ -1.79
PKNOX1P55347 RN7SL860P-201ENST00000473738 223 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.86□□□□□ -1.79
PKNOX1P55347 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.86□□□□□ -1.79
PKNOX1P55347 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.86□□□□□ -1.79
PKNOX1P55347 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.86□□□□□ -1.79
PKNOX1P55347 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.86□□□□□ -1.79
PKNOX1P55347 AC091516.1-201ENST00000549191 703 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 AL731537.2-201ENST00000561565 951 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 MIR4644-201ENST00000579929 84 ntBASIC3.86□□□□□ -1.79
PKNOX1P55347 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.86□□□□□ -1.79
PKNOX1P55347 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms