Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 Z73417.1-201ENST00000447373 778 ntBASIC4.16□□□□□ -1.74
CDH11P55287 RPS27AP15-201ENST00000447672 466 ntBASIC4.16□□□□□ -1.74
CDH11P55287 AL589880.1-201ENST00000448271 287 ntBASIC4.16□□□□□ -1.74
CDH11P55287 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH11P55287 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH11P55287 AC243772.1-201ENST00000451620 410 ntBASIC4.16□□□□□ -1.74
CDH11P55287 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH11P55287 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.16□□□□□ -1.74
CDH11P55287 PTGES3P5-201ENST00000455109 434 ntBASIC4.16□□□□□ -1.74
CDH11P55287 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.16□□□□□ -1.74
CDH11P55287 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.16□□□□□ -1.74
CDH11P55287 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH11P55287 RPS26P28-201ENST00000470806 348 ntBASIC4.16□□□□□ -1.74
CDH11P55287 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH11P55287 AC073522.1-201ENST00000483312 377 ntBASIC4.16□□□□□ -1.74
CDH11P55287 CEACAMP10-202ENST00000495431 496 ntBASIC4.16□□□□□ -1.74
CDH11P55287 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDH11P55287 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH11P55287 AC098799.3-201ENST00000506095 438 ntBASIC4.16□□□□□ -1.74
CDH11P55287 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.16□□□□□ -1.74
CDH11P55287 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH11P55287 AC112673.1-201ENST00000513168 575 ntBASIC4.16□□□□□ -1.74
CDH11P55287 snoZ278.1-201ENST00000517059 112 ntBASIC4.16□□□□□ -1.74
CDH11P55287 IGJP1-201ENST00000522682 475 ntBASIC4.16□□□□□ -1.74
CDH11P55287 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH11P55287 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH11P55287 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.16□□□□□ -1.74
CDH11P55287 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH11P55287 AL121834.1-201ENST00000572284 509 ntBASIC4.16□□□□□ -1.74
CDH11P55287 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH11P55287 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.16□□□□□ -1.74
CDH11P55287 MIR4666A-201ENST00000580160 79 ntBASIC4.16□□□□□ -1.74
CDH11P55287 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH11P55287 ELOCP28-201ENST00000590044 317 ntBASIC4.16□□□□□ -1.74
CDH11P55287 AC011453.2-201ENST00000603737 729 ntBASIC4.16□□□□□ -1.74
CDH11P55287 AC093424.1-201ENST00000604999 338 ntBASIC4.16□□□□□ -1.74
CDH11P55287 AC023813.4-201ENST00000607580 580 ntBASIC4.16□□□□□ -1.74
CDH11P55287 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH11P55287 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.16□□□□□ -1.74
CDH11P55287 AC092608.3-201ENST00000625017 386 ntBASIC4.16□□□□□ -1.74
CDH11P55287 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CDH11P55287 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.16□□□□□ -1.74
CDH11P55287 AC009313.2-201ENST00000417893 1941 ntBASIC4.16□□□□□ -1.74
CDH11P55287 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CDH11P55287 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDH11P55287 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDH11P55287 BX005019.1-201ENST00000561881 1810 ntBASIC4.16□□□□□ -1.74
CDH11P55287 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CDH11P55287 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
CDH11P55287 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDH11P55287 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CDH11P55287 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CDH11P55287 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDH11P55287 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.15□□□□□ -1.74
CDH11P55287 AC006971.1-201ENST00000407916 4486 ntBASIC4.15□□□□□ -1.74
CDH11P55287 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CDH11P55287 AC079741.1-201ENST00000321498 212 ntBASIC4.15□□□□□ -1.75
CDH11P55287 RNU6-304P-201ENST00000364855 107 ntBASIC4.15□□□□□ -1.75
CDH11P55287 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDH11P55287 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDH11P55287 SNORD116-12-201ENST00000384468 92 ntBASIC4.15□□□□□ -1.75
CDH11P55287 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CDH11P55287 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH11P55287 RSU1P3-201ENST00000412878 835 ntBASIC4.15□□□□□ -1.75
CDH11P55287 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH11P55287 AL356320.2-201ENST00000417263 507 ntBASIC4.15□□□□□ -1.75
CDH11P55287 KRR1P1-201ENST00000419430 803 ntBASIC4.15□□□□□ -1.75
CDH11P55287 OR2X1P-201ENST00000421144 687 ntBASIC4.15□□□□□ -1.75
CDH11P55287 RPS12P5-201ENST00000423449 371 ntBASIC4.15□□□□□ -1.75
CDH11P55287 CENPIP1-201ENST00000425713 902 ntBASIC4.15□□□□□ -1.75
CDH11P55287 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.15□□□□□ -1.75
CDH11P55287 AL009174.1-201ENST00000426577 416 ntBASIC4.15□□□□□ -1.75
CDH11P55287 AC073069.1-201ENST00000428657 441 ntBASIC4.15□□□□□ -1.75
CDH11P55287 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH11P55287 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH11P55287 CR769776.1-201ENST00000441254 787 ntBASIC4.15□□□□□ -1.75
CDH11P55287 RPS7P5-201ENST00000441482 581 ntBASIC4.15□□□□□ -1.75
CDH11P55287 HMGB3P6-201ENST00000444896 598 ntBASIC4.15□□□□□ -1.75
CDH11P55287 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH11P55287 AC112492.1-201ENST00000449607 712 ntBASIC4.15□□□□□ -1.75
CDH11P55287 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH11P55287 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH11P55287 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH11P55287 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDH11P55287 UBA52P3-201ENST00000491303 382 ntBASIC4.15□□□□□ -1.75
CDH11P55287 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH11P55287 OR51K1P-201ENST00000510214 950 ntBASIC4.15□□□□□ -1.75
CDH11P55287 AC010285.3-201ENST00000511668 676 ntBASIC4.15□□□□□ -1.75
CDH11P55287 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH11P55287 RNU2-30P-201ENST00000516209 141 ntBASIC4.15□□□□□ -1.75
CDH11P55287 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH11P55287 IGKV2-36-201ENST00000519999 223 ntBASIC4.15□□□□□ -1.75
CDH11P55287 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH11P55287 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.15□□□□□ -1.75
CDH11P55287 AC010306.1-201ENST00000523223 1117 ntBASIC4.15□□□□□ -1.75
CDH11P55287 AC139103.1-201ENST00000534696 1030 ntBASIC4.15□□□□□ -1.75
CDH11P55287 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.15□□□□□ -1.75
CDH11P55287 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.15□□□□□ -1.75
CDH11P55287 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CDH11P55287 MTND6P33-201ENST00000571794 183 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms