Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 HNRNPDP2-201ENST00000406475 478 ntBASIC5.03□□□□□ -1.6
COPB1P53618 RNA5SP498-201ENST00000411342 120 ntBASIC5.03□□□□□ -1.6
COPB1P53618 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.03□□□□□ -1.6
COPB1P53618 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.03□□□□□ -1.6
COPB1P53618 AL365203.2-201ENST00000423444 196 ntBASIC5.03□□□□□ -1.6
COPB1P53618 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.03□□□□□ -1.6
COPB1P53618 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.03□□□□□ -1.6
COPB1P53618 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.03□□□□□ -1.6
COPB1P53618 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.03□□□□□ -1.6
COPB1P53618 FTH1P16-201ENST00000435241 552 ntBASIC5.03□□□□□ -1.6
COPB1P53618 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.03□□□□□ -1.6
COPB1P53618 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.03□□□□□ -1.6
COPB1P53618 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.03□□□□□ -1.6
COPB1P53618 AC073387.1-201ENST00000453261 709 ntBASIC5.03□□□□□ -1.6
COPB1P53618 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.03□□□□□ -1.6
COPB1P53618 RPS29P22-201ENST00000472363 168 ntBASIC5.03□□□□□ -1.6
COPB1P53618 RAP1BP2-201ENST00000478270 544 ntBASIC5.03□□□□□ -1.6
COPB1P53618 AC084024.2-201ENST00000503480 791 ntBASIC5.03□□□□□ -1.6
COPB1P53618 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.03□□□□□ -1.6
COPB1P53618 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.03□□□□□ -1.6
COPB1P53618 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.03□□□□□ -1.6
COPB1P53618 AC090151.1-201ENST00000520784 730 ntBASIC5.03□□□□□ -1.6
COPB1P53618 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.03□□□□□ -1.6
COPB1P53618 C1GALT1P3-201ENST00000522049 819 ntBASIC5.03□□□□□ -1.6
COPB1P53618 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.03□□□□□ -1.6
COPB1P53618 AP001880.2-201ENST00000538233 448 ntBASIC5.03□□□□□ -1.6
COPB1P53618 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.03□□□□□ -1.6
COPB1P53618 AC087465.1-201ENST00000560574 245 ntBASIC5.03□□□□□ -1.6
COPB1P53618 AADACP1-206ENST00000561502 1193 ntBASIC5.03□□□□□ -1.6
COPB1P53618 AP002360.3-201ENST00000607673 710 ntBASIC5.03□□□□□ -1.6
COPB1P53618 AC092140.2-201ENST00000618027 521 ntBASIC5.03□□□□□ -1.6
COPB1P53618 ZNF663P-202ENST00000641770 1131 ntBASIC5.03□□□□□ -1.6
COPB1P53618 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
COPB1P53618 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COPB1P53618 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.03□□□□□ -1.6
COPB1P53618 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
COPB1P53618 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COPB1P53618 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
COPB1P53618 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COPB1P53618 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
COPB1P53618 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
COPB1P53618 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COPB1P53618 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
COPB1P53618 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
COPB1P53618 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
COPB1P53618 NACA3P-201ENST00000359690 648 ntBASIC5.02□□□□□ -1.61
COPB1P53618 RNU6-157P-201ENST00000383957 107 ntBASIC5.02□□□□□ -1.61
COPB1P53618 AL034374.1-201ENST00000406329 351 ntBASIC5.02□□□□□ -1.61
COPB1P53618 RN7SKP267-201ENST00000410381 285 ntBASIC5.02□□□□□ -1.61
COPB1P53618 RN7SKP182-201ENST00000410772 298 ntBASIC5.02□□□□□ -1.61
COPB1P53618 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.02□□□□□ -1.61
COPB1P53618 TRGV6-201ENST00000417928 299 ntBASIC5.02□□□□□ -1.61
COPB1P53618 AC140479.3-201ENST00000418944 1126 ntBASIC5.02□□□□□ -1.61
COPB1P53618 AC004074.1-201ENST00000421810 1063 ntBASIC5.02□□□□□ -1.61
COPB1P53618 PDSS1P1-201ENST00000422953 1114 ntBASIC5.02□□□□□ -1.61
COPB1P53618 OR5AW1P-201ENST00000426334 1006 ntBASIC5.02□□□□□ -1.61
COPB1P53618 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.02□□□□□ -1.61
COPB1P53618 NRBF2P3-201ENST00000432731 865 ntBASIC5.02□□□□□ -1.61
COPB1P53618 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.02□□□□□ -1.61
COPB1P53618 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.02□□□□□ -1.61
COPB1P53618 AL929288.2-201ENST00000446368 407 ntBASIC5.02□□□□□ -1.61
COPB1P53618 RPS27AP15-201ENST00000447672 466 ntBASIC5.02□□□□□ -1.61
COPB1P53618 RBMY2TP-201ENST00000451162 947 ntBASIC5.02□□□□□ -1.61
COPB1P53618 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COPB1P53618 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.02□□□□□ -1.61
COPB1P53618 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COPB1P53618 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.02□□□□□ -1.61
COPB1P53618 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COPB1P53618 ANKRD26P4-201ENST00000455755 950 ntBASIC5.02□□□□□ -1.61
COPB1P53618 AL133477.1-201ENST00000457472 514 ntBASIC5.02□□□□□ -1.61
COPB1P53618 MTND2P28-201ENST00000457540 1044 ntBASIC5.02□□□□□ -1.61
COPB1P53618 AC011979.1-201ENST00000472300 483 ntBASIC5.02□□□□□ -1.61
COPB1P53618 RN7SL860P-201ENST00000473738 223 ntBASIC5.02□□□□□ -1.61
COPB1P53618 AC091959.2-201ENST00000477363 321 ntBASIC5.02□□□□□ -1.61
COPB1P53618 AC037198.2-201ENST00000478845 733 ntBASIC5.02□□□□□ -1.61
COPB1P53618 AC007686.1-201ENST00000488511 463 ntBASIC5.02□□□□□ -1.61
COPB1P53618 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.02□□□□□ -1.61
COPB1P53618 MTND1P22-201ENST00000510572 951 ntBASIC5.02□□□□□ -1.61
COPB1P53618 NDUFB4P12-201ENST00000513465 390 ntBASIC5.02□□□□□ -1.61
COPB1P53618 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.02□□□□□ -1.61
COPB1P53618 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.02□□□□□ -1.61
COPB1P53618 AC090819.1-201ENST00000523800 1111 ntBASIC5.02□□□□□ -1.61
COPB1P53618 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.02□□□□□ -1.61
COPB1P53618 OR5AZ1P-201ENST00000527448 943 ntBASIC5.02□□□□□ -1.61
COPB1P53618 BRD9P1-201ENST00000529855 560 ntBASIC5.02□□□□□ -1.61
COPB1P53618 AC100770.1-201ENST00000532310 322 ntBASIC5.02□□□□□ -1.61
COPB1P53618 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COPB1P53618 AC008083.2-201ENST00000546707 476 ntBASIC5.02□□□□□ -1.61
COPB1P53618 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.02□□□□□ -1.61
COPB1P53618 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.02□□□□□ -1.61
COPB1P53618 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.02□□□□□ -1.61
COPB1P53618 AC068790.2-201ENST00000602601 557 ntBASIC5.02□□□□□ -1.61
COPB1P53618 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.02□□□□□ -1.61
COPB1P53618 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.02□□□□□ -1.61
COPB1P53618 AC090181.2-201ENST00000602975 672 ntBASIC5.02□□□□□ -1.61
COPB1P53618 MFSD8-245ENST00000641743 948 ntBASIC5.02□□□□□ -1.61
COPB1P53618 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COPB1P53618 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COPB1P53618 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COPB1P53618 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms