Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.68□□□□□ -1.82
GTF2A1P52655 KLKP1-201ENST00000595979 403 ntBASIC3.68□□□□□ -1.82
GTF2A1P52655 AC115286.1-201ENST00000604298 434 ntBASIC3.68□□□□□ -1.82
GTF2A1P52655 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
GTF2A1P52655 uc_338.13-201ENST00000618243 179 ntBASIC3.68□□□□□ -1.82
GTF2A1P52655 AP005019.3-201ENST00000620418 560 ntBASIC3.68□□□□□ -1.82
GTF2A1P52655 AC105105.5-201ENST00000622635 1294 ntBASIC3.68□□□□□ -1.82
GTF2A1P52655 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
GTF2A1P52655 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.68□□□□□ -1.82
GTF2A1P52655 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
GTF2A1P52655 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.67□□□□□ -1.82
GTF2A1P52655 API5P2-201ENST00000397055 1498 ntBASIC3.67□□□□□ -1.82
GTF2A1P52655 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
GTF2A1P52655 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
GTF2A1P52655 AL034403.1-201ENST00000399414 885 ntBASIC3.67□□□□□ -1.82
GTF2A1P52655 AL445189.1-201ENST00000405722 338 ntBASIC3.67□□□□□ -1.82
GTF2A1P52655 AL031121.1-201ENST00000406553 254 ntBASIC3.67□□□□□ -1.82
GTF2A1P52655 SPTLC1P2-201ENST00000407089 121 ntBASIC3.67□□□□□ -1.82
GTF2A1P52655 RNA5SP36-201ENST00000410197 133 ntBASIC3.67□□□□□ -1.82
GTF2A1P52655 RN7SKP229-201ENST00000410465 302 ntBASIC3.67□□□□□ -1.82
GTF2A1P52655 NRBF2P2-201ENST00000413087 861 ntBASIC3.67□□□□□ -1.82
GTF2A1P52655 MFSD13B-201ENST00000420133 1290 ntBASIC3.67□□□□□ -1.82
GTF2A1P52655 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.67□□□□□ -1.82
GTF2A1P52655 AC244505.4-201ENST00000434905 287 ntBASIC3.67□□□□□ -1.82
GTF2A1P52655 AC105402.2-201ENST00000438503 358 ntBASIC3.67□□□□□ -1.82
GTF2A1P52655 SSXP5-201ENST00000443473 287 ntBASIC3.67□□□□□ -1.82
GTF2A1P52655 RPL36AP13-201ENST00000457490 317 ntBASIC3.67□□□□□ -1.82
GTF2A1P52655 RN7SL354P-201ENST00000469282 294 ntBASIC3.67□□□□□ -1.82
GTF2A1P52655 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.67□□□□□ -1.82
GTF2A1P52655 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
GTF2A1P52655 TMEM248P1-201ENST00000510579 951 ntBASIC3.67□□□□□ -1.82
GTF2A1P52655 RNU7-143P-201ENST00000516781 65 ntBASIC3.67□□□□□ -1.82
GTF2A1P52655 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.67□□□□□ -1.82
GTF2A1P52655 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.67□□□□□ -1.82
GTF2A1P52655 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
GTF2A1P52655 AC068714.1-201ENST00000559623 800 ntBASIC3.67□□□□□ -1.82
GTF2A1P52655 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.67□□□□□ -1.82
GTF2A1P52655 AC034268.2-201ENST00000571784 482 ntBASIC3.67□□□□□ -1.82
GTF2A1P52655 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.67□□□□□ -1.82
GTF2A1P52655 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
GTF2A1P52655 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.67□□□□□ -1.82
GTF2A1P52655 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.67□□□□□ -1.82
GTF2A1P52655 AL445528.2-201ENST00000620582 470 ntBASIC3.67□□□□□ -1.82
GTF2A1P52655 AC021106.3-201ENST00000623925 531 ntBASIC3.67□□□□□ -1.82
GTF2A1P52655 ATE1-AS1-202ENST00000636460 506 ntBASIC3.67□□□□□ -1.82
GTF2A1P52655 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
GTF2A1P52655 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
GTF2A1P52655 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
GTF2A1P52655 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.67□□□□□ -1.82
GTF2A1P52655 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
GTF2A1P52655 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.66□□□□□ -1.82
GTF2A1P52655 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.66□□□□□ -1.82
GTF2A1P52655 AC007256.1-201ENST00000392253 2765 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 AL356274.2-201ENST00000624379 3752 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.66□□□□□ -1.82
GTF2A1P52655 AL645927.1-201ENST00000396783 406 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 RPL23AP59-201ENST00000399415 461 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
GTF2A1P52655 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.66□□□□□ -1.82
GTF2A1P52655 RPEP3-201ENST00000425462 676 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.66□□□□□ -1.82
GTF2A1P52655 YWHAZP7-201ENST00000436906 631 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 RPS7P5-201ENST00000441482 581 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.66□□□□□ -1.82
GTF2A1P52655 VN1R48P-201ENST00000448149 1036 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 RPL7P61-201ENST00000451721 751 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC3.66□□□□□ -1.82
GTF2A1P52655 HMGN1P18-201ENST00000457642 277 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
GTF2A1P52655 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.66□□□□□ -1.82
GTF2A1P52655 AC010683.1-201ENST00000473673 378 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 AC016687.1-201ENST00000482574 353 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.66□□□□□ -1.82
GTF2A1P52655 ATG10-AS1-201ENST00000504846 648 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 NDUFB5P1-201ENST00000508134 564 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC3.66□□□□□ -1.82
GTF2A1P52655 RNU6-943P-201ENST00000516960 98 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 AC104027.1-201ENST00000521887 300 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 MTND1P6-201ENST00000523621 946 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 AP001922.4-201ENST00000526967 290 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 AP000676.2-201ENST00000529711 301 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.66□□□□□ -1.82
GTF2A1P52655 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.66□□□□□ -1.82
GTF2A1P52655 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.66□□□□□ -1.82
GTF2A1P52655 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.66□□□□□ -1.82
GTF2A1P52655 PCNPP1-201ENST00000552501 511 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.66□□□□□ -1.82
GTF2A1P52655 AL163153.1-201ENST00000554223 283 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.66□□□□□ -1.82
GTF2A1P52655 AC010735.1-201ENST00000567305 1026 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.66□□□□□ -1.82
GTF2A1P52655 AC110743.1-201ENST00000584870 478 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 AC011468.4-201ENST00000603942 409 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 AL451044.1-201ENST00000604867 238 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 AC113403.1-201ENST00000604910 193 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 AC007423.1-201ENST00000605009 627 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.66□□□□□ -1.82
GTF2A1P52655 AC012409.3-201ENST00000611343 981 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 AC099669.2-201ENST00000616549 437 ntBASIC3.66□□□□□ -1.82
GTF2A1P52655 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms