Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.23□□□□□ -1.73
CASP4P49662 RNU6-347P-201ENST00000516658 105 ntBASIC4.23□□□□□ -1.73
CASP4P49662 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.23□□□□□ -1.73
CASP4P49662 OR4A12P-201ENST00000530847 918 ntBASIC4.23□□□□□ -1.73
CASP4P49662 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.23□□□□□ -1.73
CASP4P49662 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.23□□□□□ -1.73
CASP4P49662 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.23□□□□□ -1.73
CASP4P49662 AC067805.1-201ENST00000559344 470 ntBASIC4.23□□□□□ -1.73
CASP4P49662 NPM1P47-201ENST00000560843 856 ntBASIC4.23□□□□□ -1.73
CASP4P49662 AC090877.1-201ENST00000561418 344 ntBASIC4.23□□□□□ -1.73
CASP4P49662 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.23□□□□□ -1.73
CASP4P49662 RN7SL703P-201ENST00000578485 302 ntBASIC4.23□□□□□ -1.73
CASP4P49662 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.23□□□□□ -1.73
CASP4P49662 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC4.23□□□□□ -1.73
CASP4P49662 AL133247.2-201ENST00000603236 482 ntBASIC4.23□□□□□ -1.73
CASP4P49662 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.23□□□□□ -1.73
CASP4P49662 AL606490.9-201ENST00000603331 271 ntBASIC4.23□□□□□ -1.73
CASP4P49662 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.23□□□□□ -1.73
CASP4P49662 AP003392.5-201ENST00000607857 415 ntBASIC4.23□□□□□ -1.73
CASP4P49662 AL645927.2-201ENST00000618350 349 ntBASIC4.23□□□□□ -1.73
CASP4P49662 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CASP4P49662 AC079684.1-201ENST00000621405 437 ntBASIC4.23□□□□□ -1.73
CASP4P49662 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.23□□□□□ -1.73
CASP4P49662 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CASP4P49662 AC096656.1-201ENST00000623826 1364 ntBASIC4.23□□□□□ -1.73
CASP4P49662 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CASP4P49662 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CASP4P49662 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.23□□□□□ -1.73
CASP4P49662 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CASP4P49662 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.22□□□□□ -1.73
CASP4P49662 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.22□□□□□ -1.73
CASP4P49662 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.22□□□□□ -1.73
CASP4P49662 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CASP4P49662 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CASP4P49662 RNU6-213P-201ENST00000384051 104 ntBASIC4.22□□□□□ -1.73
CASP4P49662 MIR92A2-201ENST00000385299 75 ntBASIC4.22□□□□□ -1.73
CASP4P49662 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.22□□□□□ -1.73
CASP4P49662 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.22□□□□□ -1.73
CASP4P49662 RPS6P12-201ENST00000432491 726 ntBASIC4.22□□□□□ -1.73
CASP4P49662 AL356535.1-201ENST00000440335 398 ntBASIC4.22□□□□□ -1.73
CASP4P49662 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CASP4P49662 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.22□□□□□ -1.73
CASP4P49662 RPS3AP6-201ENST00000484430 795 ntBASIC4.22□□□□□ -1.73
CASP4P49662 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.22□□□□□ -1.73
CASP4P49662 MIR2116-201ENST00000517221 80 ntBASIC4.22□□□□□ -1.73
CASP4P49662 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.22□□□□□ -1.73
CASP4P49662 SMARCE1P4-201ENST00000523647 241 ntBASIC4.22□□□□□ -1.73
CASP4P49662 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.22□□□□□ -1.73
CASP4P49662 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.22□□□□□ -1.73
CASP4P49662 OR8R1P-201ENST00000543943 764 ntBASIC4.22□□□□□ -1.73
CASP4P49662 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.22□□□□□ -1.73
CASP4P49662 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.22□□□□□ -1.73
CASP4P49662 AL049870.4-201ENST00000555741 486 ntBASIC4.22□□□□□ -1.73
CASP4P49662 AGGF1P6-201ENST00000569213 976 ntBASIC4.22□□□□□ -1.73
CASP4P49662 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.22□□□□□ -1.73
CASP4P49662 MIR3160-1-201ENST00000577972 85 ntBASIC4.22□□□□□ -1.73
CASP4P49662 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CASP4P49662 AC090953.1-201ENST00000604305 1092 ntBASIC4.22□□□□□ -1.73
CASP4P49662 AL390816.3-201ENST00000604527 1066 ntBASIC4.22□□□□□ -1.73
CASP4P49662 AL139089.1-201ENST00000620372 975 ntBASIC4.22□□□□□ -1.73
CASP4P49662 MIR4727-201ENST00000622232 55 ntBASIC4.22□□□□□ -1.73
CASP4P49662 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CASP4P49662 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CASP4P49662 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.22□□□□□ -1.73
CASP4P49662 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CASP4P49662 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.22□□□□□ -1.73
CASP4P49662 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CASP4P49662 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CASP4P49662 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CASP4P49662 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
CASP4P49662 AC093311.1-201ENST00000506586 2021 ntBASIC4.21□□□□□ -1.74
CASP4P49662 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.21□□□□□ -1.74
CASP4P49662 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
CASP4P49662 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CASP4P49662 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.21□□□□□ -1.74
CASP4P49662 MIR199A2-201ENST00000385289 110 ntBASIC4.21□□□□□ -1.74
CASP4P49662 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CASP4P49662 RNU6-628P-201ENST00000410675 107 ntBASIC4.21□□□□□ -1.74
CASP4P49662 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.21□□□□□ -1.74
CASP4P49662 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.21□□□□□ -1.74
CASP4P49662 AL121877.1-201ENST00000453704 622 ntBASIC4.21□□□□□ -1.74
CASP4P49662 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.21□□□□□ -1.74
CASP4P49662 AC005229.2-201ENST00000456995 399 ntBASIC4.21□□□□□ -1.74
CASP4P49662 VN1R105P-201ENST00000486595 910 ntBASIC4.21□□□□□ -1.74
CASP4P49662 HMGB1P3-201ENST00000502802 616 ntBASIC4.21□□□□□ -1.74
CASP4P49662 AC010460.1-201ENST00000507087 466 ntBASIC4.21□□□□□ -1.74
CASP4P49662 AC018797.3-201ENST00000513388 1241 ntBASIC4.21□□□□□ -1.74
CASP4P49662 RNA5SP208-201ENST00000516156 78 ntBASIC4.21□□□□□ -1.74
CASP4P49662 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.21□□□□□ -1.74
CASP4P49662 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.21□□□□□ -1.74
CASP4P49662 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.21□□□□□ -1.74
CASP4P49662 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.21□□□□□ -1.74
CASP4P49662 AC007423.1-201ENST00000605009 627 ntBASIC4.21□□□□□ -1.74
CASP4P49662 AC139769.3-201ENST00000618383 175 ntBASIC4.21□□□□□ -1.74
CASP4P49662 AL356121.2-201ENST00000624715 780 ntBASIC4.21□□□□□ -1.74
CASP4P49662 ATE1-AS1-202ENST00000636460 506 ntBASIC4.21□□□□□ -1.74
CASP4P49662 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.21□□□□□ -1.74
CASP4P49662 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.21□□□□□ -1.74
CASP4P49662 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CASP4P49662 AC134882.1-201ENST00000603738 1676 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms