Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RAB28P3-201ENST00000448325 597 ntBASIC3.79□□□□□ -1.8
HTTP42858 SLC31A1P1-201ENST00000451221 567 ntBASIC3.79□□□□□ -1.8
HTTP42858 RN7SL863P-201ENST00000462370 296 ntBASIC3.79□□□□□ -1.8
HTTP42858 AC021678.1-201ENST00000505195 936 ntBASIC3.79□□□□□ -1.8
HTTP42858 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.79□□□□□ -1.8
HTTP42858 RPL21P7-201ENST00000557463 483 ntBASIC3.79□□□□□ -1.8
HTTP42858 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.79□□□□□ -1.8
HTTP42858 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC3.79□□□□□ -1.8
HTTP42858 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HTTP42858 Z95114.1-201ENST00000624264 14574 ntBASIC3.79□□□□□ -1.8
HTTP42858 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HTTP42858 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
HTTP42858 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HTTP42858 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HTTP42858 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.79□□□□□ -1.8
HTTP42858 REREP1Y-201ENST00000422655 198 ntBASIC3.79□□□□□ -1.8
HTTP42858 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.79□□□□□ -1.8
HTTP42858 MOB1AP1-201ENST00000430903 535 ntBASIC3.79□□□□□ -1.8
HTTP42858 REREP2Y-201ENST00000439103 200 ntBASIC3.79□□□□□ -1.8
HTTP42858 AC010095.1-201ENST00000443543 144 ntBASIC3.79□□□□□ -1.8
HTTP42858 RPL7P36-201ENST00000444633 681 ntBASIC3.79□□□□□ -1.8
HTTP42858 AC098824.1-201ENST00000453565 980 ntBASIC3.79□□□□□ -1.8
HTTP42858 RPL31P50-201ENST00000471002 296 ntBASIC3.79□□□□□ -1.8
HTTP42858 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.79□□□□□ -1.8
HTTP42858 AC008489.1-201ENST00000524271 483 ntBASIC3.79□□□□□ -1.8
HTTP42858 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.79□□□□□ -1.8
HTTP42858 AC005242.1-201ENST00000585658 438 ntBASIC3.79□□□□□ -1.8
HTTP42858 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.79□□□□□ -1.8
HTTP42858 PCA3_2.1-201ENST00000612507 409 ntBASIC3.79□□□□□ -1.8
HTTP42858 AC015871.5-202ENST00000623252 701 ntBASIC3.79□□□□□ -1.8
HTTP42858 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HTTP42858 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HTTP42858 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HTTP42858 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.79□□□□□ -1.8
HTTP42858 AC099563.1-201ENST00000456086 418 ntBASIC3.79□□□□□ -1.8
HTTP42858 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.79□□□□□ -1.8
HTTP42858 AP006245.1-201ENST00000522549 120 ntBASIC3.79□□□□□ -1.8
HTTP42858 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HTTP42858 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.79□□□□□ -1.8
HTTP42858 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HTTP42858 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.78□□□□□ -1.8
HTTP42858 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.78□□□□□ -1.8
HTTP42858 DEFB109F-201ENST00000491870 277 ntBASIC3.78□□□□□ -1.8
HTTP42858 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC3.78□□□□□ -1.8
HTTP42858 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.78□□□□□ -1.8
HTTP42858 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.78□□□□□ -1.8
HTTP42858 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.78□□□□□ -1.8
HTTP42858 MIR2682-201ENST00000580305 110 ntBASIC3.78□□□□□ -1.8
HTTP42858 AC012603.1-201ENST00000606424 528 ntBASIC3.78□□□□□ -1.8
HTTP42858 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HTTP42858 MR1-209ENST00000617803 7584 ntTSL 5 BASIC3.78□□□□□ -1.8
HTTP42858 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.78□□□□□ -1.8
HTTP42858 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HTTP42858 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
HTTP42858 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HTTP42858 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HTTP42858 DDX6P1-205ENST00000441966 1436 ntBASIC3.78□□□□□ -1.8
HTTP42858 RN7SKP222-201ENST00000410651 315 ntBASIC3.78□□□□□ -1.8
HTTP42858 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.78□□□□□ -1.8
HTTP42858 AL591424.2-201ENST00000617023 128 ntBASIC3.78□□□□□ -1.8
HTTP42858 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HTTP42858 AL137918.1-201ENST00000624542 1922 ntBASIC3.78□□□□□ -1.8
HTTP42858 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HTTP42858 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.78□□□□□ -1.8
HTTP42858 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HTTP42858 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
HTTP42858 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.78□□□□□ -1.81
HTTP42858 BX119904.3-201ENST00000428194 957 ntBASIC3.77□□□□□ -1.81
HTTP42858 AC006480.1-201ENST00000449887 378 ntBASIC3.77□□□□□ -1.81
HTTP42858 PSMA2P1-201ENST00000526365 646 ntBASIC3.77□□□□□ -1.81
HTTP42858 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HTTP42858 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HTTP42858 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HTTP42858 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
HTTP42858 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HTTP42858 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HTTP42858 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.77□□□□□ -1.81
HTTP42858 AC110794.1-201ENST00000505816 425 ntBASIC3.77□□□□□ -1.81
HTTP42858 AC022080.3-201ENST00000544433 482 ntBASIC3.77□□□□□ -1.81
HTTP42858 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.77□□□□□ -1.81
HTTP42858 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HTTP42858 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HTTP42858 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC3.77□□□□□ -1.81
HTTP42858 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.77□□□□□ -1.81
HTTP42858 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HTTP42858 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HTTP42858 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HTTP42858 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HTTP42858 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HTTP42858 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
HTTP42858 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.77□□□□□ -1.81
HTTP42858 AC069285.2-201ENST00000440210 275 ntBASIC3.77□□□□□ -1.81
HTTP42858 RPS4XP2-201ENST00000458402 793 ntBASIC3.77□□□□□ -1.81
HTTP42858 MIR7111-201ENST00000619751 72 ntBASIC3.77□□□□□ -1.81
HTTP42858 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HTTP42858 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HTTP42858 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.76□□□□□ -1.81
HTTP42858 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.76□□□□□ -1.81
HTTP42858 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.76□□□□□ -1.81
HTTP42858 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms