Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.02□□□□□ -1.61
CIITAP33076 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.02□□□□□ -1.61
CIITAP33076 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.02□□□□□ -1.61
CIITAP33076 AC011611.5-201ENST00000552477 578 ntBASIC5.02□□□□□ -1.61
CIITAP33076 RPL23AP97-201ENST00000568955 471 ntBASIC5.02□□□□□ -1.61
CIITAP33076 MIR4277-201ENST00000578298 84 ntBASIC5.02□□□□□ -1.61
CIITAP33076 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.02□□□□□ -1.61
CIITAP33076 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.02□□□□□ -1.61
CIITAP33076 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.02□□□□□ -1.61
CIITAP33076 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.02□□□□□ -1.61
CIITAP33076 AC090525.3-201ENST00000605601 189 ntBASIC5.02□□□□□ -1.61
CIITAP33076 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.02□□□□□ -1.61
CIITAP33076 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.02□□□□□ -1.61
CIITAP33076 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CIITAP33076 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CIITAP33076 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CIITAP33076 AC090971.4-201ENST00000560291 1800 ntBASIC5.02□□□□□ -1.61
CIITAP33076 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.02□□□□□ -1.61
CIITAP33076 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.01□□□□□ -1.61
CIITAP33076 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CIITAP33076 AL672167.1-205ENST00000641112 3080 ntBASIC5.01□□□□□ -1.61
CIITAP33076 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CIITAP33076 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
CIITAP33076 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CIITAP33076 MTCO1P18-201ENST00000455518 1419 ntBASIC5.01□□□□□ -1.61
CIITAP33076 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CIITAP33076 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CIITAP33076 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CIITAP33076 RNA5SP509-201ENST00000364577 119 ntBASIC5.01□□□□□ -1.61
CIITAP33076 Y_RNA.472-201ENST00000384322 102 ntBASIC5.01□□□□□ -1.61
CIITAP33076 RPL7P27-201ENST00000403775 720 ntBASIC5.01□□□□□ -1.61
CIITAP33076 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CIITAP33076 RNU6-603P-201ENST00000411403 107 ntBASIC5.01□□□□□ -1.61
CIITAP33076 MTND4P3-201ENST00000417829 541 ntBASIC5.01□□□□□ -1.61
CIITAP33076 AL513175.2-201ENST00000422071 443 ntBASIC5.01□□□□□ -1.61
CIITAP33076 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.01□□□□□ -1.61
CIITAP33076 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.01□□□□□ -1.61
CIITAP33076 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.01□□□□□ -1.61
CIITAP33076 NPM1P33-201ENST00000438918 872 ntBASIC5.01□□□□□ -1.61
CIITAP33076 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.01□□□□□ -1.61
CIITAP33076 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.01□□□□□ -1.61
CIITAP33076 DDX39BP2-208ENST00000453923 258 ntBASIC5.01□□□□□ -1.61
CIITAP33076 AC244505.3-201ENST00000454598 187 ntBASIC5.01□□□□□ -1.61
CIITAP33076 RPS27AP17-201ENST00000463344 455 ntBASIC5.01□□□□□ -1.61
CIITAP33076 AC011276.1-201ENST00000469688 323 ntBASIC5.01□□□□□ -1.61
CIITAP33076 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
CIITAP33076 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.01□□□□□ -1.61
CIITAP33076 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.01□□□□□ -1.61
CIITAP33076 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.01□□□□□ -1.61
CIITAP33076 AC090151.1-201ENST00000520784 730 ntBASIC5.01□□□□□ -1.61
CIITAP33076 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.01□□□□□ -1.61
CIITAP33076 MTCO2P15-201ENST00000532655 656 ntBASIC5.01□□□□□ -1.61
CIITAP33076 CYCSP28-201ENST00000534284 321 ntBASIC5.01□□□□□ -1.61
CIITAP33076 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.01□□□□□ -1.61
CIITAP33076 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.01□□□□□ -1.61
CIITAP33076 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.01□□□□□ -1.61
CIITAP33076 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CIITAP33076 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.01□□□□□ -1.61
CIITAP33076 VN1R78P-201ENST00000597393 564 ntBASIC5.01□□□□□ -1.61
CIITAP33076 AC018618.2-201ENST00000604770 446 ntBASIC5.01□□□□□ -1.61
CIITAP33076 AC025588.2-201ENST00000604851 466 ntBASIC5.01□□□□□ -1.61
CIITAP33076 SNORD91B-202ENST00000608459 222 ntBASIC5.01□□□□□ -1.61
CIITAP33076 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.01□□□□□ -1.61
CIITAP33076 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.01□□□□□ -1.61
CIITAP33076 FRG1HP-204ENST00000617940 757 ntBASIC5.01□□□□□ -1.61
CIITAP33076 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.01□□□□□ -1.61
CIITAP33076 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CIITAP33076 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
CIITAP33076 EIF2AP4-201ENST00000424793 1781 ntBASIC5.01□□□□□ -1.61
CIITAP33076 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CIITAP33076 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
CIITAP33076 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5□□□□□ -1.61
CIITAP33076 AL592182.3-201ENST00000642132 3304 ntBASIC5□□□□□ -1.61
CIITAP33076 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5□□□□□ -1.61
CIITAP33076 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CIITAP33076 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CIITAP33076 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5□□□□□ -1.61
CIITAP33076 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5□□□□□ -1.61
CIITAP33076 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CIITAP33076 METTL21EP-201ENST00000298105 713 ntBASIC5□□□□□ -1.61
CIITAP33076 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
CIITAP33076 UBE2Q2P1-202ENST00000354771 883 ntBASIC5□□□□□ -1.61
CIITAP33076 IGKV7-3-201ENST00000357453 298 ntBASIC5□□□□□ -1.61
CIITAP33076 RNU4-68P-201ENST00000364314 141 ntBASIC5□□□□□ -1.61
CIITAP33076 SNORD96B-201ENST00000386148 79 ntBASIC5□□□□□ -1.61
CIITAP33076 ATP5F1P2-201ENST00000398143 760 ntBASIC5□□□□□ -1.61
CIITAP33076 AC016397.1-201ENST00000412463 242 ntBASIC5□□□□□ -1.61
CIITAP33076 AC013404.1-201ENST00000413068 249 ntBASIC5□□□□□ -1.61
CIITAP33076 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5□□□□□ -1.61
CIITAP33076 RPS7P9-201ENST00000414704 586 ntBASIC5□□□□□ -1.61
CIITAP33076 SNRPFP1-201ENST00000414761 252 ntBASIC5□□□□□ -1.61
CIITAP33076 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5□□□□□ -1.61
CIITAP33076 RPS3AP37-201ENST00000419176 745 ntBASIC5□□□□□ -1.61
CIITAP33076 AL590609.2-201ENST00000421430 368 ntBASIC5□□□□□ -1.61
CIITAP33076 AC010099.3-201ENST00000423896 409 ntBASIC5□□□□□ -1.61
CIITAP33076 RPL23AP25-201ENST00000430973 463 ntBASIC5□□□□□ -1.61
CIITAP33076 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5□□□□□ -1.61
CIITAP33076 SETD6P1-201ENST00000444575 317 ntBASIC5□□□□□ -1.61
CIITAP33076 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5□□□□□ -1.61
CIITAP33076 VN1R32P-201ENST00000452234 905 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms