Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 ARF4P1-201ENST00000605447 541 ntBASIC4.25□□□□□ -1.73
PTPN4P29074 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPN4P29074 U6.48-201ENST00000618523 106 ntBASIC4.25□□□□□ -1.73
PTPN4P29074 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPN4P29074 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.25□□□□□ -1.73
PTPN4P29074 AC134882.1-201ENST00000603738 1676 ntBASIC4.25□□□□□ -1.73
PTPN4P29074 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PTPN4P29074 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PTPN4P29074 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN4P29074 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN4P29074 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.24□□□□□ -1.73
PTPN4P29074 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PTPN4P29074 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN4P29074 SNORA70C-201ENST00000384538 135 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 RN7SKP56-201ENST00000410513 331 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.24□□□□□ -1.73
PTPN4P29074 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPN4P29074 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPN4P29074 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.24□□□□□ -1.73
PTPN4P29074 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 ELOCP11-201ENST00000436690 332 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN4P29074 AF228730.2-201ENST00000438784 848 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 AL356535.1-201ENST00000440335 398 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 AC097499.1-201ENST00000444277 208 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 ELOCP16-201ENST00000444494 332 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 PHBP16-201ENST00000446318 950 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 NUTF2P3-201ENST00000448540 384 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.24□□□□□ -1.73
PTPN4P29074 MTND2P6-201ENST00000455337 1030 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 MTND2P30-201ENST00000456663 382 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPN4P29074 RPS20P4-201ENST00000461659 355 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.24□□□□□ -1.73
PTPN4P29074 AL592156.1-201ENST00000508758 304 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 RNA5SP497-201ENST00000516081 97 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 MIR2114-201ENST00000516645 80 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 SNORA76.2-201ENST00000517095 137 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 IGKV2-36-201ENST00000519999 223 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
PTPN4P29074 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN4P29074 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPN4P29074 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.24□□□□□ -1.73
PTPN4P29074 PSMB7P1-201ENST00000556349 514 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 MIR3160-1-201ENST00000577972 85 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPN4P29074 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
PTPN4P29074 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.24□□□□□ -1.73
PTPN4P29074 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN4P29074 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.24□□□□□ -1.73
PTPN4P29074 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.24□□□□□ -1.73
PTPN4P29074 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.24□□□□□ -1.73
PTPN4P29074 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN4P29074 AC020923.1-201ENST00000624021 917 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 AC006065.6-201ENST00000625201 545 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.24□□□□□ -1.73
PTPN4P29074 AL133412.1-201ENST00000380194 2992 ntBASIC4.24□□□□□ -1.73
PTPN4P29074 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN4P29074 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN4P29074 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPN4P29074 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.23□□□□□ -1.73
PTPN4P29074 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PTPN4P29074 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPN4P29074 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPN4P29074 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PTPN4P29074 U3.15-201ENST00000365398 212 ntBASIC4.23□□□□□ -1.73
PTPN4P29074 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN4P29074 XKRYP4-201ENST00000414395 483 ntBASIC4.23□□□□□ -1.73
PTPN4P29074 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN4P29074 AC234782.4-201ENST00000417646 1048 ntBASIC4.23□□□□□ -1.73
PTPN4P29074 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPN4P29074 RPS27AP12-201ENST00000429552 465 ntBASIC4.23□□□□□ -1.73
PTPN4P29074 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN4P29074 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN4P29074 XKRYP5-201ENST00000449659 483 ntBASIC4.23□□□□□ -1.73
PTPN4P29074 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPN4P29074 RPL30P11-201ENST00000495304 339 ntBASIC4.23□□□□□ -1.73
PTPN4P29074 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPN4P29074 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTPN4P29074 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.23□□□□□ -1.73
PTPN4P29074 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN4P29074 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTPN4P29074 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PTPN4P29074 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN4P29074 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.23□□□□□ -1.73
PTPN4P29074 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPN4P29074 AC007224.1-201ENST00000564410 144 ntBASIC4.23□□□□□ -1.73
PTPN4P29074 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.23□□□□□ -1.73
PTPN4P29074 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.23□□□□□ -1.73
PTPN4P29074 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.23□□□□□ -1.73
PTPN4P29074 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPN4P29074 AL445567.2-201ENST00000618935 498 ntBASIC4.23□□□□□ -1.73
PTPN4P29074 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPN4P29074 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPN4P29074 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.23□□□□□ -1.73
PTPN4P29074 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.23□□□□□ -1.73
PTPN4P29074 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.23□□□□□ -1.73
PTPN4P29074 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PTPN4P29074 DCAF13P3-201ENST00000561147 1334 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 219.6 ms