Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 SNORA31-201ENST00000362607 130 ntBASIC3.42□□□□□ -1.86
HLA-DMAP28067 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
HLA-DMAP28067 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DMAP28067 RNU6-356P-201ENST00000384140 107 ntBASIC3.42□□□□□ -1.86
HLA-DMAP28067 AL109941.1-201ENST00000401925 229 ntBASIC3.42□□□□□ -1.86
HLA-DMAP28067 RPS27AP11-201ENST00000402798 447 ntBASIC3.42□□□□□ -1.86
HLA-DMAP28067 HSPE1P26-201ENST00000405341 275 ntBASIC3.42□□□□□ -1.86
HLA-DMAP28067 MIR1251-201ENST00000408552 70 ntBASIC3.42□□□□□ -1.86
HLA-DMAP28067 SNORA57.3-201ENST00000411095 141 ntBASIC3.42□□□□□ -1.86
HLA-DMAP28067 GTF3AP1-201ENST00000416942 1004 ntBASIC3.42□□□□□ -1.86
HLA-DMAP28067 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.42□□□□□ -1.86
HLA-DMAP28067 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DMAP28067 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DMAP28067 CYCSP43-201ENST00000438233 310 ntBASIC3.42□□□□□ -1.86
HLA-DMAP28067 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DMAP28067 RPS7P5-201ENST00000441482 581 ntBASIC3.42□□□□□ -1.86
HLA-DMAP28067 AC009963.2-201ENST00000453431 138 ntBASIC3.42□□□□□ -1.86
HLA-DMAP28067 AC098824.1-201ENST00000453565 980 ntBASIC3.42□□□□□ -1.86
HLA-DMAP28067 AC006539.3-201ENST00000454258 129 ntBASIC3.42□□□□□ -1.86
HLA-DMAP28067 C1DP3-201ENST00000455013 423 ntBASIC3.42□□□□□ -1.86
HLA-DMAP28067 RPL6P9-201ENST00000466502 859 ntBASIC3.42□□□□□ -1.86
HLA-DMAP28067 RN7SL354P-201ENST00000469282 294 ntBASIC3.42□□□□□ -1.86
HLA-DMAP28067 AP000893.1-201ENST00000474462 794 ntBASIC3.42□□□□□ -1.86
HLA-DMAP28067 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.42□□□□□ -1.86
HLA-DMAP28067 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DMAP28067 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.42□□□□□ -1.86
HLA-DMAP28067 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DMAP28067 CCT8P1-201ENST00000413611 1657 ntBASIC3.42□□□□□ -1.86
HLA-DMAP28067 AC058791.1-201ENST00000608412 3198 ntBASIC3.42□□□□□ -1.86
HLA-DMAP28067 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DMAP28067 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HLA-DMAP28067 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DMAP28067 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMAP28067 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
HLA-DMAP28067 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.41□□□□□ -1.86
HLA-DMAP28067 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMAP28067 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMAP28067 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMAP28067 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
HLA-DMAP28067 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMAP28067 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMAP28067 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMAP28067 U1.1-201ENST00000384101 164 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 PTMAP5-201ENST00000393073 333 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMAP28067 EI24P2-201ENST00000397776 1076 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 RPL26P37-201ENST00000411983 438 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 P2RY10P2-201ENST00000416730 913 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DMAP28067 AC105402.2-201ENST00000438503 358 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 ARL5AP3-201ENST00000439327 386 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 AC006011.1-201ENST00000442758 349 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 CFTRP1-201ENST00000456646 183 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 RPL7P32-201ENST00000457119 744 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 TRBV8-2-201ENST00000475637 270 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 RN7SL826P-201ENST00000479724 288 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 AC004453.1-201ENST00000487895 408 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 AC078918.1-201ENST00000498515 228 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 UBE2CP3-201ENST00000502715 450 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 AC091917.2-201ENST00000505002 744 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
HLA-DMAP28067 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
HLA-DMAP28067 RNU6-1004P-201ENST00000516584 111 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 RN7SKP234-201ENST00000517173 224 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DMAP28067 HIGD1AP18-201ENST00000520730 278 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 BRD9P1-201ENST00000529855 560 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DMAP28067 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DMAP28067 AC025260.1-201ENST00000548858 430 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DMAP28067 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.41□□□□□ -1.86
HLA-DMAP28067 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMAP28067 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMAP28067 AC114878.2-201ENST00000604863 1251 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 AC018754.1-201ENST00000607486 925 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 AC133644.2-201ENST00000608142 540 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 AC107905.1-201ENST00000616204 426 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.41□□□□□ -1.86
HLA-DMAP28067 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMAP28067 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMAP28067 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMAP28067 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
HLA-DMAP28067 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HLA-DMAP28067 AL158163.1-201ENST00000603915 1649 ntBASIC3.41□□□□□ -1.86
HLA-DMAP28067 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
HLA-DMAP28067 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.4□□□□□ -1.86
HLA-DMAP28067 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DMAP28067 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HLA-DMAP28067 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HLA-DMAP28067 SNORA51.1-201ENST00000363243 140 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 RNA5SP189-201ENST00000364920 115 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 SNORA70E-201ENST00000384492 135 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 RPL23AP59-201ENST00000399415 461 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DMAP28067 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.4□□□□□ -1.87
HLA-DMAP28067 AL356387.2-201ENST00000422272 243 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 AL049610.1-201ENST00000423374 372 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 RPEP3-201ENST00000425462 676 ntBASIC3.4□□□□□ -1.87
HLA-DMAP28067 OR5AW1P-201ENST00000426334 1006 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms