Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC073869.7-201ENST00000640874 297 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 AP000542.2-201ENST00000623199 6179 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
COL5A1P20908 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.58□□□□□ -1.84
COL5A1P20908 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.58□□□□□ -1.84
COL5A1P20908 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL5A1P20908 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
COL5A1P20908 AC007823.1-201ENST00000569932 1566 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL5A1P20908 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
COL5A1P20908 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.58□□□□□ -1.84
COL5A1P20908 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL5A1P20908 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
COL5A1P20908 NACA3P-201ENST00000359690 648 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 RNA5SP50-201ENST00000363731 107 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 KCTD9P3-201ENST00000434597 1169 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 SNORA70.18-201ENST00000516696 98 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.58□□□□□ -1.84
COL5A1P20908 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.58□□□□□ -1.84
COL5A1P20908 DPRXP4-201ENST00000578053 568 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 OOSP1P2-201ENST00000579644 351 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 KC877982.1-201ENST00000602313 470 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 AL390816.3-201ENST00000604527 1066 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.58□□□□□ -1.84
COL5A1P20908 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
COL5A1P20908 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.58□□□□□ -1.84
COL5A1P20908 BTBD10P1-201ENST00000549824 1352 ntBASIC3.58□□□□□ -1.84
COL5A1P20908 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.58□□□□□ -1.84
COL5A1P20908 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL5A1P20908 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
COL5A1P20908 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.58□□□□□ -1.84
COL5A1P20908 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL5A1P20908 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
COL5A1P20908 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.57□□□□□ -1.84
COL5A1P20908 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
COL5A1P20908 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL5A1P20908 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL5A1P20908 RN7SKP284-201ENST00000411002 343 ntBASIC3.57□□□□□ -1.84
COL5A1P20908 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.57□□□□□ -1.84
COL5A1P20908 ATP5JP1-201ENST00000431631 322 ntBASIC3.57□□□□□ -1.84
COL5A1P20908 AL831737.1-201ENST00000441288 271 ntBASIC3.57□□□□□ -1.84
COL5A1P20908 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
COL5A1P20908 RPL5P16-201ENST00000471467 790 ntBASIC3.57□□□□□ -1.84
COL5A1P20908 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.57□□□□□ -1.84
COL5A1P20908 AC009303.3-201ENST00000591103 736 ntBASIC3.57□□□□□ -1.84
COL5A1P20908 AC015813.4-201ENST00000610469 179 ntBASIC3.57□□□□□ -1.84
COL5A1P20908 AC135507.2-201ENST00000612443 309 ntBASIC3.57□□□□□ -1.84
COL5A1P20908 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
COL5A1P20908 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
COL5A1P20908 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL5A1P20908 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
COL5A1P20908 RNA5SP104-201ENST00000410989 118 ntBASIC3.56□□□□□ -1.84
COL5A1P20908 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.56□□□□□ -1.84
COL5A1P20908 AC245054.1-201ENST00000420944 258 ntBASIC3.56□□□□□ -1.84
COL5A1P20908 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.56□□□□□ -1.84
COL5A1P20908 USP12PY-201ENST00000427677 1064 ntBASIC3.56□□□□□ -1.84
COL5A1P20908 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.56□□□□□ -1.84
COL5A1P20908 EIF4A1P11-201ENST00000451239 222 ntBASIC3.56□□□□□ -1.84
COL5A1P20908 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.56□□□□□ -1.84
COL5A1P20908 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL5A1P20908 AC069306.1-201ENST00000507006 843 ntBASIC3.56□□□□□ -1.84
COL5A1P20908 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.56□□□□□ -1.84
COL5A1P20908 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC3.56□□□□□ -1.84
COL5A1P20908 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.56□□□□□ -1.84
COL5A1P20908 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.56□□□□□ -1.84
COL5A1P20908 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.56□□□□□ -1.84
COL5A1P20908 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.56□□□□□ -1.84
COL5A1P20908 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.56□□□□□ -1.84
COL5A1P20908 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.56□□□□□ -1.84
COL5A1P20908 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.56□□□□□ -1.84
COL5A1P20908 TRAV15-201ENST00000556680 249 ntBASIC3.56□□□□□ -1.84
COL5A1P20908 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.56□□□□□ -1.84
COL5A1P20908 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.56□□□□□ -1.84
COL5A1P20908 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL5A1P20908 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
COL5A1P20908 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.56□□□□□ -1.84
COL5A1P20908 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC3.56□□□□□ -1.84
COL5A1P20908 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL5A1P20908 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.56□□□□□ -1.84
COL5A1P20908 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.56□□□□□ -1.84
COL5A1P20908 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.56□□□□□ -1.84
COL5A1P20908 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL5A1P20908 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.56□□□□□ -1.84
COL5A1P20908 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL5A1P20908 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
COL5A1P20908 SNORA48.5-201ENST00000391143 135 ntBASIC3.56□□□□□ -1.84
COL5A1P20908 MTND4LP20-201ENST00000402379 270 ntBASIC3.56□□□□□ -1.84
COL5A1P20908 AC073063.1-201ENST00000434352 607 ntBASIC3.56□□□□□ -1.84
COL5A1P20908 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.56□□□□□ -1.84
COL5A1P20908 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.56□□□□□ -1.84
COL5A1P20908 HMGB3P22-202ENST00000451823 572 ntBASIC3.56□□□□□ -1.84
COL5A1P20908 RBMY2UP-201ENST00000453474 324 ntBASIC3.56□□□□□ -1.84
COL5A1P20908 RNA5SP208-201ENST00000516156 78 ntBASIC3.56□□□□□ -1.84
COL5A1P20908 IGHV3-32-201ENST00000519182 355 ntBASIC3.56□□□□□ -1.84
COL5A1P20908 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.56□□□□□ -1.84
COL5A1P20908 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC3.56□□□□□ -1.84
COL5A1P20908 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.56□□□□□ -1.84
COL5A1P20908 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.56□□□□□ -1.84
COL5A1P20908 AL354976.1-201ENST00000613843 387 ntBASIC3.56□□□□□ -1.84
COL5A1P20908 AL122125.1-201ENST00000616999 600 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms