Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 MYL8P-204ENST00000431574 518 ntBASIC3.59□□□□□ -1.83
VCANP13611 RNU4-29P-201ENST00000515943 174 ntBASIC3.59□□□□□ -1.83
VCANP13611 AC092868.3-201ENST00000560515 784 ntBASIC3.59□□□□□ -1.83
VCANP13611 AC064859.1-201ENST00000624741 174 ntBASIC3.59□□□□□ -1.83
VCANP13611 MTCO1P8-201ENST00000416914 1523 ntBASIC3.59□□□□□ -1.84
VCANP13611 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
VCANP13611 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
VCANP13611 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
VCANP13611 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC3.59□□□□□ -1.84
VCANP13611 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
VCANP13611 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC3.59□□□□□ -1.84
VCANP13611 SNORA67.4-201ENST00000384688 142 ntBASIC3.59□□□□□ -1.84
VCANP13611 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.59□□□□□ -1.84
VCANP13611 AC128713.1-201ENST00000471495 306 ntBASIC3.59□□□□□ -1.84
VCANP13611 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.59□□□□□ -1.84
VCANP13611 RPS29P21-201ENST00000496272 170 ntBASIC3.59□□□□□ -1.84
VCANP13611 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.59□□□□□ -1.84
VCANP13611 AC127502.3-201ENST00000636170 1206 ntBASIC3.59□□□□□ -1.84
VCANP13611 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.58□□□□□ -1.84
VCANP13611 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
VCANP13611 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VCANP13611 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
VCANP13611 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC3.58□□□□□ -1.84
VCANP13611 AC108022.1-201ENST00000493466 478 ntBASIC3.58□□□□□ -1.84
VCANP13611 AC108941.1-201ENST00000502853 530 ntBASIC3.58□□□□□ -1.84
VCANP13611 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.58□□□□□ -1.84
VCANP13611 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.58□□□□□ -1.84
VCANP13611 DEFB122-202ENST00000569013 197 ntBASIC3.58□□□□□ -1.84
VCANP13611 RN7SL371P-201ENST00000578099 267 ntBASIC3.58□□□□□ -1.84
VCANP13611 AC097505.1-201ENST00000610199 565 ntBASIC3.58□□□□□ -1.84
VCANP13611 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.58□□□□□ -1.84
VCANP13611 AL590808.1-201ENST00000618696 141 ntBASIC3.58□□□□□ -1.84
VCANP13611 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VCANP13611 RPL36AP10-201ENST00000421785 322 ntBASIC3.58□□□□□ -1.84
VCANP13611 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.58□□□□□ -1.84
VCANP13611 AC017037.2-201ENST00000513850 890 ntBASIC3.58□□□□□ -1.84
VCANP13611 AC008694.2-201ENST00000517591 306 ntBASIC3.58□□□□□ -1.84
VCANP13611 AP000873.5-201ENST00000533906 236 ntBASIC3.58□□□□□ -1.84
VCANP13611 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.58□□□□□ -1.84
VCANP13611 AC022968.1-201ENST00000567372 442 ntBASIC3.58□□□□□ -1.84
VCANP13611 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.58□□□□□ -1.84
VCANP13611 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.58□□□□□ -1.84
VCANP13611 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC3.58□□□□□ -1.84
VCANP13611 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
VCANP13611 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VCANP13611 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
VCANP13611 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
VCANP13611 AC018442.3-201ENST00000523025 183 ntBASIC3.57□□□□□ -1.84
VCANP13611 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.57□□□□□ -1.84
VCANP13611 AC090286.3-201ENST00000573133 187 ntBASIC3.57□□□□□ -1.84
VCANP13611 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.57□□□□□ -1.84
VCANP13611 LSM1P2-201ENST00000604911 322 ntBASIC3.57□□□□□ -1.84
VCANP13611 ATP1B3P1-201ENST00000605365 821 ntBASIC3.57□□□□□ -1.84
VCANP13611 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC3.57□□□□□ -1.84
VCANP13611 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VCANP13611 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VCANP13611 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VCANP13611 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VCANP13611 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.57□□□□□ -1.84
VCANP13611 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
VCANP13611 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
VCANP13611 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
VCANP13611 UBTFL3-201ENST00000418934 1024 ntBASIC3.57□□□□□ -1.84
VCANP13611 UBTFL6-201ENST00000477929 1024 ntBASIC3.57□□□□□ -1.84
VCANP13611 AADACP1-206ENST00000561502 1193 ntBASIC3.57□□□□□ -1.84
VCANP13611 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.57□□□□□ -1.84
VCANP13611 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.57□□□□□ -1.84
VCANP13611 AC067852.3-201ENST00000589177 561 ntBASIC3.57□□□□□ -1.84
VCANP13611 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.57□□□□□ -1.84
VCANP13611 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.57□□□□□ -1.84
VCANP13611 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
VCANP13611 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
VCANP13611 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.57□□□□□ -1.84
VCANP13611 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VCANP13611 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
VCANP13611 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
VCANP13611 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.57□□□□□ -1.84
VCANP13611 GTF3AP5-201ENST00000442645 697 ntBASIC3.57□□□□□ -1.84
VCANP13611 AC099563.1-201ENST00000456086 418 ntBASIC3.57□□□□□ -1.84
VCANP13611 AC079089.3-201ENST00000603094 673 ntBASIC3.57□□□□□ -1.84
VCANP13611 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
VCANP13611 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
VCANP13611 HSPA8P19-201ENST00000505359 1517 ntBASIC3.57□□□□□ -1.84
VCANP13611 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
VCANP13611 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VCANP13611 GVINP1-202ENST00000531871 7271 ntBASIC3.57□□□□□ -1.84
VCANP13611 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VCANP13611 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.56□□□□□ -1.84
VCANP13611 FRG1CP-201ENST00000358464 769 ntBASIC3.56□□□□□ -1.84
VCANP13611 U3.12-201ENST00000364498 214 ntBASIC3.56□□□□□ -1.84
VCANP13611 MIR7-2-201ENST00000384970 110 ntBASIC3.56□□□□□ -1.84
VCANP13611 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC3.56□□□□□ -1.84
VCANP13611 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.56□□□□□ -1.84
VCANP13611 CREM-238ENST00000488741 651 ntTSL 2 BASIC3.56□□□□□ -1.84
VCANP13611 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.56□□□□□ -1.84
VCANP13611 PCBP2P3-201ENST00000509726 843 ntBASIC3.56□□□□□ -1.84
VCANP13611 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
VCANP13611 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
VCANP13611 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC3.56□□□□□ -1.84
VCANP13611 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms