Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.25□□□□□ -1.73
TPM1P09493 AC068831.4-201ENST00000556118 109 ntBASIC4.25□□□□□ -1.73
TPM1P09493 CYP2C60P-201ENST00000566088 139 ntBASIC4.25□□□□□ -1.73
TPM1P09493 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.25□□□□□ -1.73
TPM1P09493 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.25□□□□□ -1.73
TPM1P09493 MIR6868-201ENST00000611215 58 ntBASIC4.25□□□□□ -1.73
TPM1P09493 AL589935.2-201ENST00000616471 1231 ntBASIC4.25□□□□□ -1.73
TPM1P09493 AL590410.1-201ENST00000617925 333 ntBASIC4.25□□□□□ -1.73
TPM1P09493 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TPM1P09493 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
TPM1P09493 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.25□□□□□ -1.73
TPM1P09493 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TPM1P09493 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TPM1P09493 RNVU1-6-201ENST00000364688 164 ntBASIC4.24□□□□□ -1.73
TPM1P09493 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TPM1P09493 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TPM1P09493 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TPM1P09493 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.24□□□□□ -1.73
TPM1P09493 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.24□□□□□ -1.73
TPM1P09493 RPS27AP13-201ENST00000498403 237 ntBASIC4.24□□□□□ -1.73
TPM1P09493 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.24□□□□□ -1.73
TPM1P09493 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.24□□□□□ -1.73
TPM1P09493 AC093840.1-201ENST00000511599 336 ntBASIC4.24□□□□□ -1.73
TPM1P09493 NDUFB4P9-201ENST00000511646 388 ntBASIC4.24□□□□□ -1.73
TPM1P09493 Vault.1-201ENST00000516474 102 ntBASIC4.24□□□□□ -1.73
TPM1P09493 AC008802.1-201ENST00000519121 791 ntBASIC4.24□□□□□ -1.73
TPM1P09493 PDCL2P2-201ENST00000533651 189 ntBASIC4.24□□□□□ -1.73
TPM1P09493 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.24□□□□□ -1.73
TPM1P09493 OR4U1P-201ENST00000554958 912 ntBASIC4.24□□□□□ -1.73
TPM1P09493 MIR5047-201ENST00000579212 100 ntBASIC4.24□□□□□ -1.73
TPM1P09493 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.24□□□□□ -1.73
TPM1P09493 AC022146.1-201ENST00000595307 847 ntBASIC4.24□□□□□ -1.73
TPM1P09493 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.24□□□□□ -1.73
TPM1P09493 MIR8059-201ENST00000620427 81 ntBASIC4.24□□□□□ -1.73
TPM1P09493 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TPM1P09493 LARP1BP1-201ENST00000506036 1359 ntBASIC4.24□□□□□ -1.73
TPM1P09493 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TPM1P09493 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
TPM1P09493 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.24□□□□□ -1.73
TPM1P09493 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TPM1P09493 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TPM1P09493 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
TPM1P09493 RNA5SP509-201ENST00000364577 119 ntBASIC4.23□□□□□ -1.73
TPM1P09493 AL391417.1-201ENST00000404100 426 ntBASIC4.23□□□□□ -1.73
TPM1P09493 ELOCP19-201ENST00000411919 318 ntBASIC4.23□□□□□ -1.73
TPM1P09493 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.23□□□□□ -1.73
TPM1P09493 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.23□□□□□ -1.73
TPM1P09493 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.23□□□□□ -1.73
TPM1P09493 AL138878.2-201ENST00000440581 1241 ntBASIC4.23□□□□□ -1.73
TPM1P09493 MTCO3P17-201ENST00000443775 513 ntBASIC4.23□□□□□ -1.73
TPM1P09493 VN1R48P-201ENST00000448149 1036 ntBASIC4.23□□□□□ -1.73
TPM1P09493 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.23□□□□□ -1.73
TPM1P09493 RPL35AP28-201ENST00000459730 331 ntBASIC4.23□□□□□ -1.73
TPM1P09493 AP000873.1-201ENST00000463987 400 ntBASIC4.23□□□□□ -1.73
TPM1P09493 AC011276.1-201ENST00000469688 323 ntBASIC4.23□□□□□ -1.73
TPM1P09493 UQCRHP4-201ENST00000471686 272 ntBASIC4.23□□□□□ -1.73
TPM1P09493 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.23□□□□□ -1.73
TPM1P09493 HMGB1P21-201ENST00000502313 581 ntBASIC4.23□□□□□ -1.73
TPM1P09493 RN7SKP60-201ENST00000516985 239 ntBASIC4.23□□□□□ -1.73
TPM1P09493 AC025857.1-201ENST00000525252 377 ntBASIC4.23□□□□□ -1.73
TPM1P09493 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.23□□□□□ -1.73
TPM1P09493 AL139174.1-201ENST00000531489 886 ntBASIC4.23□□□□□ -1.73
TPM1P09493 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.23□□□□□ -1.73
TPM1P09493 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.23□□□□□ -1.73
TPM1P09493 AC106785.3-201ENST00000564064 847 ntBASIC4.23□□□□□ -1.73
TPM1P09493 MIR3186-201ENST00000577404 85 ntBASIC4.23□□□□□ -1.73
TPM1P09493 AC115989.2-201ENST00000578640 563 ntBASIC4.23□□□□□ -1.73
TPM1P09493 MIR4425-201ENST00000580572 84 ntBASIC4.23□□□□□ -1.73
TPM1P09493 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.23□□□□□ -1.73
TPM1P09493 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.23□□□□□ -1.73
TPM1P09493 AL390816.3-201ENST00000604527 1066 ntBASIC4.23□□□□□ -1.73
TPM1P09493 AL049634.3-201ENST00000604968 457 ntBASIC4.23□□□□□ -1.73
TPM1P09493 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.23□□□□□ -1.73
TPM1P09493 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.23□□□□□ -1.73
TPM1P09493 AC117490.2-201ENST00000610042 594 ntBASIC4.23□□□□□ -1.73
TPM1P09493 AC011944.2-201ENST00000624440 683 ntBASIC4.23□□□□□ -1.73
TPM1P09493 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.23□□□□□ -1.73
TPM1P09493 AC087565.3-202ENST00000642085 1603 ntBASIC4.23□□□□□ -1.73
TPM1P09493 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
TPM1P09493 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.23□□□□□ -1.73
TPM1P09493 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.23□□□□□ -1.73
TPM1P09493 PWAR6-201ENST00000552334 4618 ntBASIC4.23□□□□□ -1.73
TPM1P09493 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.23□□□□□ -1.73
TPM1P09493 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
TPM1P09493 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
TPM1P09493 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TPM1P09493 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TPM1P09493 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TPM1P09493 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
TPM1P09493 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TPM1P09493 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.22□□□□□ -1.73
TPM1P09493 RNA5SP443-201ENST00000363083 132 ntBASIC4.22□□□□□ -1.73
TPM1P09493 RNU6-398P-201ENST00000384143 109 ntBASIC4.22□□□□□ -1.73
TPM1P09493 AC136624.1-201ENST00000400791 413 ntBASIC4.22□□□□□ -1.73
TPM1P09493 AMZ2P2-201ENST00000406819 1057 ntBASIC4.22□□□□□ -1.73
TPM1P09493 RNA5SP498-201ENST00000411342 120 ntBASIC4.22□□□□□ -1.73
TPM1P09493 TPT1P2-201ENST00000413105 503 ntBASIC4.22□□□□□ -1.73
TPM1P09493 AC114814.2-201ENST00000419195 485 ntBASIC4.22□□□□□ -1.73
TPM1P09493 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.22□□□□□ -1.73
TPM1P09493 AC245517.2-201ENST00000442890 346 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms