Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
CXCL1P09341 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.89□□□□□ -1.95
CXCL1P09341 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
CXCL1P09341 AC005183.1-201ENST00000603687 1979 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 OR4K17-201ENST00000315543 1032 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 MIR148B-201ENST00000362252 99 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 SKINT1L-201ENST00000401057 817 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CXCL1P09341 SNORA11.5-201ENST00000408163 128 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 RN7SKP229-201ENST00000410465 302 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 AC126124.2-201ENST00000413542 321 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 AC009965.2-201ENST00000425328 970 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 AC006989.1-201ENST00000427212 131 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC2.89□□□□□ -1.95
CXCL1P09341 AC093716.1-201ENST00000435923 377 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 RPL23AP22-201ENST00000437556 453 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 FTH1P1-201ENST00000437933 532 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 MTCYBP31-201ENST00000438855 1122 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 ACTR3P2-201ENST00000439585 1257 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC2.89□□□□□ -1.95
CXCL1P09341 RPS4XP4-201ENST00000443195 763 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC2.89□□□□□ -1.95
CXCL1P09341 RANP8-201ENST00000444720 713 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.89□□□□□ -1.95
CXCL1P09341 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.89□□□□□ -1.95
CXCL1P09341 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.89□□□□□ -1.95
CXCL1P09341 FCF1P7-201ENST00000451185 558 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC2.89□□□□□ -1.95
CXCL1P09341 MTND2P28-201ENST00000457540 1044 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.89□□□□□ -1.95
CXCL1P09341 AP001086.1-201ENST00000494882 321 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 SNX5P1-201ENST00000505757 1041 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 Vault.1-201ENST00000516474 102 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 RNA5SP380-201ENST00000517190 98 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC2.89□□□□□ -1.95
CXCL1P09341 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CXCL1P09341 CYCSP29-201ENST00000533731 318 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.89□□□□□ -1.95
CXCL1P09341 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC2.89□□□□□ -1.95
CXCL1P09341 TVP23BP1-201ENST00000557500 617 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 AP001180.3-201ENST00000582221 145 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC2.89□□□□□ -1.95
CXCL1P09341 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC2.89□□□□□ -1.95
CXCL1P09341 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.89□□□□□ -1.95
CXCL1P09341 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC2.89□□□□□ -1.95
CXCL1P09341 AC093765.1-201ENST00000603758 881 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.89□□□□□ -1.95
CXCL1P09341 AL137849.1-201ENST00000604767 169 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 AC019193.2-201ENST00000610012 634 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC2.89□□□□□ -1.95
CXCL1P09341 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC2.89□□□□□ -1.95
CXCL1P09341 U6.98-201ENST00000637157 84 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CXCL1P09341 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CXCL1P09341 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CXCL1P09341 USP8P1-201ENST00000494673 3183 ntBASIC2.89□□□□□ -1.95
CXCL1P09341 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.89□□□□□ -1.95
CXCL1P09341 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CXCL1P09341 AL592494.2-201ENST00000425455 1548 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CXCL1P09341 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CXCL1P09341 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
CXCL1P09341 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
CXCL1P09341 RNA5SP443-201ENST00000363083 132 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 MIR199A2-201ENST00000385289 110 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 RN7SKP222-201ENST00000410651 315 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 RNA5SP107-201ENST00000411358 122 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC2.88□□□□□ -1.95
CXCL1P09341 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.88□□□□□ -1.95
CXCL1P09341 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.88□□□□□ -1.95
CXCL1P09341 AC092832.1-201ENST00000422934 400 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 FAR2P4-202ENST00000425399 584 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 BX890604.2-201ENST00000427883 474 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC2.88□□□□□ -1.95
CXCL1P09341 NDUFB1P1-201ENST00000435191 180 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 Z95152.1-201ENST00000453556 656 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 SNORD108-201ENST00000459332 71 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 RN7SL860P-201ENST00000473738 223 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 AL132838.2-201ENST00000492041 314 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 RPL23AP73-201ENST00000492507 471 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 AC105233.1-201ENST00000498840 781 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 OR5M14P-201ENST00000506803 618 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.88□□□□□ -1.95
CXCL1P09341 RNA5SP208-201ENST00000516156 78 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 AC087369.1-201ENST00000520775 996 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC2.88□□□□□ -1.95
CXCL1P09341 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC2.88□□□□□ -1.95
CXCL1P09341 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC2.88□□□□□ -1.95
CXCL1P09341 AC004024.1-201ENST00000549244 247 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 TRAV37-201ENST00000553906 342 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.88□□□□□ -1.95
CXCL1P09341 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.88□□□□□ -1.95
CXCL1P09341 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.88□□□□□ -1.95
CXCL1P09341 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.88□□□□□ -1.95
CXCL1P09341 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC2.88□□□□□ -1.95
CXCL1P09341 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC2.88□□□□□ -1.95
CXCL1P09341 AC067852.4-201ENST00000590314 478 ntBASIC2.88□□□□□ -1.95
CXCL1P09341 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC2.88□□□□□ -1.95
CXCL1P09341 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.88□□□□□ -1.95
CXCL1P09341 IGKV1OR2-6-201ENST00000603485 277 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 282.1 ms