Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DQB2P05538 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
HLA-DQB2P05538 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.69□□□□□ -1.82
HLA-DQB2P05538 RNU6-283P-201ENST00000364788 107 ntBASIC3.69□□□□□ -1.82
HLA-DQB2P05538 RNU1-64P-201ENST00000365443 163 ntBASIC3.69□□□□□ -1.82
HLA-DQB2P05538 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
HLA-DQB2P05538 OR13C3-201ENST00000374781 1108 ntBASIC3.69□□□□□ -1.82
HLA-DQB2P05538 MTHFD2P2-201ENST00000407725 247 ntBASIC3.69□□□□□ -1.82
HLA-DQB2P05538 AL603766.1-201ENST00000407763 664 ntBASIC3.69□□□□□ -1.82
HLA-DQB2P05538 AC096644.3-201ENST00000416788 338 ntBASIC3.69□□□□□ -1.82
HLA-DQB2P05538 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DQB2P05538 AC245054.1-201ENST00000420944 258 ntBASIC3.69□□□□□ -1.82
HLA-DQB2P05538 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DQB2P05538 RRM2P4-201ENST00000441721 562 ntBASIC3.69□□□□□ -1.82
HLA-DQB2P05538 AC010655.1-201ENST00000449336 292 ntBASIC3.69□□□□□ -1.82
HLA-DQB2P05538 AP002371.1-201ENST00000463604 433 ntBASIC3.69□□□□□ -1.82
HLA-DQB2P05538 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.69□□□□□ -1.82
HLA-DQB2P05538 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DQB2P05538 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.69□□□□□ -1.82
HLA-DQB2P05538 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.69□□□□□ -1.82
HLA-DQB2P05538 BNIP3P5-201ENST00000562290 498 ntBASIC3.69□□□□□ -1.82
HLA-DQB2P05538 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DQB2P05538 AL391497.1-201ENST00000608671 547 ntBASIC3.69□□□□□ -1.82
HLA-DQB2P05538 MIR6798-201ENST00000612887 67 ntBASIC3.69□□□□□ -1.82
HLA-DQB2P05538 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.69□□□□□ -1.82
HLA-DQB2P05538 AL732618.1-201ENST00000623251 301 ntBASIC3.69□□□□□ -1.82
HLA-DQB2P05538 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
HLA-DQB2P05538 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DQB2P05538 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HLA-DQB2P05538 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AC027287.1-201ENST00000553115 1453 ntBASIC3.68□□□□□ -1.82
HLA-DQB2P05538 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AC007685.1-201ENST00000329806 452 ntBASIC3.68□□□□□ -1.82
HLA-DQB2P05538 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AC025750.1-201ENST00000399891 379 ntBASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AL391417.1-201ENST00000404100 426 ntBASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AL445189.1-201ENST00000405722 338 ntBASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AL356967.1-201ENST00000406305 431 ntBASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AC114814.2-201ENST00000419195 485 ntBASIC3.68□□□□□ -1.82
HLA-DQB2P05538 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AL035246.1-201ENST00000433554 1255 ntBASIC3.68□□□□□ -1.82
HLA-DQB2P05538 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 VN1R96P-201ENST00000446052 858 ntBASIC3.68□□□□□ -1.82
HLA-DQB2P05538 MTCO3P20-201ENST00000454926 688 ntBASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AC005229.2-201ENST00000456995 399 ntBASIC3.68□□□□□ -1.82
HLA-DQB2P05538 ACTR3P3-201ENST00000480448 893 ntBASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 VTA1P2-201ENST00000520205 911 ntBASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AC090819.1-201ENST00000523800 1111 ntBASIC3.68□□□□□ -1.82
HLA-DQB2P05538 OR5AP1P-201ENST00000529730 940 ntBASIC3.68□□□□□ -1.82
HLA-DQB2P05538 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AL121576.1-201ENST00000556055 276 ntBASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AL161912.3-201ENST00000605404 628 ntBASIC3.68□□□□□ -1.82
HLA-DQB2P05538 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AL732372.2-225ENST00000642124 456 ntBASIC3.68□□□□□ -1.82
HLA-DQB2P05538 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AL627171.1-201ENST00000618845 1308 ntBASIC3.68□□□□□ -1.82
HLA-DQB2P05538 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AC007823.1-201ENST00000569932 1566 ntBASIC3.68□□□□□ -1.82
HLA-DQB2P05538 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DQB2P05538 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DQB2P05538 AC011155.1-201ENST00000316512 456 ntBASIC3.67□□□□□ -1.82
HLA-DQB2P05538 RNA5SP42-201ENST00000364278 115 ntBASIC3.67□□□□□ -1.82
HLA-DQB2P05538 RNU6-673P-201ENST00000365084 104 ntBASIC3.67□□□□□ -1.82
HLA-DQB2P05538 RN7SKP202-201ENST00000410439 330 ntBASIC3.67□□□□□ -1.82
HLA-DQB2P05538 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DQB2P05538 ATP5A1P2-201ENST00000412323 255 ntBASIC3.67□□□□□ -1.82
HLA-DQB2P05538 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DQB2P05538 SMC4P1-201ENST00000414479 527 ntBASIC3.67□□□□□ -1.82
HLA-DQB2P05538 RPL36AP36-201ENST00000418616 301 ntBASIC3.67□□□□□ -1.82
HLA-DQB2P05538 AL035423.1-201ENST00000420331 213 ntBASIC3.67□□□□□ -1.82
HLA-DQB2P05538 SDCBPP2-201ENST00000424643 885 ntBASIC3.67□□□□□ -1.82
HLA-DQB2P05538 AL158073.1-201ENST00000426848 1104 ntBASIC3.67□□□□□ -1.82
HLA-DQB2P05538 RPL7P4-203ENST00000430239 730 ntBASIC3.67□□□□□ -1.82
HLA-DQB2P05538 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DQB2P05538 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DQB2P05538 RPS3AP46-201ENST00000448352 682 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms