Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AP002884.2-201ENST00000471647 395 ntBASIC3.36□□□□□ -1.87
SPTA1P02549 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.36□□□□□ -1.87
SPTA1P02549 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.36□□□□□ -1.87
SPTA1P02549 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.36□□□□□ -1.87
SPTA1P02549 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.36□□□□□ -1.87
SPTA1P02549 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SPTA1P02549 AC097461.1-201ENST00000568928 2821 ntBASIC3.36□□□□□ -1.87
SPTA1P02549 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
SPTA1P02549 SNORD96B-201ENST00000386148 79 ntBASIC3.36□□□□□ -1.87
SPTA1P02549 RPS23P10-201ENST00000416185 486 ntBASIC3.36□□□□□ -1.87
SPTA1P02549 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.36□□□□□ -1.87
SPTA1P02549 AC084198.1-201ENST00000477747 402 ntBASIC3.36□□□□□ -1.87
SPTA1P02549 VN1R104P-201ENST00000505115 1009 ntBASIC3.36□□□□□ -1.87
SPTA1P02549 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.36□□□□□ -1.87
SPTA1P02549 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC3.36□□□□□ -1.87
SPTA1P02549 AC104763.2-201ENST00000604179 382 ntBASIC3.36□□□□□ -1.87
SPTA1P02549 AL031658.2-201ENST00000616850 651 ntBASIC3.36□□□□□ -1.87
SPTA1P02549 AC234782.5-201ENST00000617723 324 ntBASIC3.36□□□□□ -1.87
SPTA1P02549 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
SPTA1P02549 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SPTA1P02549 AL022393.1-201ENST00000625142 1677 ntBASIC3.36□□□□□ -1.87
SPTA1P02549 AC000374.1-201ENST00000434698 1745 ntBASIC3.36□□□□□ -1.87
SPTA1P02549 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.36□□□□□ -1.87
SPTA1P02549 AC139426.3-201ENST00000605648 2059 ntBASIC3.36□□□□□ -1.87
SPTA1P02549 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SPTA1P02549 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC3.36□□□□□ -1.87
SPTA1P02549 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SPTA1P02549 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.36□□□□□ -1.87
SPTA1P02549 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
SPTA1P02549 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SPTA1P02549 SNORA48.8-201ENST00000391324 134 ntBASIC3.35□□□□□ -1.87
SPTA1P02549 HMGB3P9-201ENST00000441799 583 ntBASIC3.35□□□□□ -1.87
SPTA1P02549 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.35□□□□□ -1.87
SPTA1P02549 AL031584.1-201ENST00000447169 754 ntBASIC3.35□□□□□ -1.87
SPTA1P02549 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC3.35□□□□□ -1.87
SPTA1P02549 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.35□□□□□ -1.87
SPTA1P02549 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.35□□□□□ -1.87
SPTA1P02549 LARP7P3-201ENST00000579888 337 ntBASIC3.35□□□□□ -1.87
SPTA1P02549 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SPTA1P02549 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.35□□□□□ -1.87
SPTA1P02549 MIR1261-201ENST00000408659 82 ntBASIC3.35□□□□□ -1.87
SPTA1P02549 BTF3P9-201ENST00000418784 283 ntBASIC3.35□□□□□ -1.87
SPTA1P02549 RPS20P32-201ENST00000456044 356 ntBASIC3.35□□□□□ -1.87
SPTA1P02549 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SPTA1P02549 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.35□□□□□ -1.87
SPTA1P02549 AC063950.1-201ENST00000552036 308 ntBASIC3.35□□□□□ -1.87
SPTA1P02549 MIR5186-201ENST00000577504 120 ntBASIC3.35□□□□□ -1.87
SPTA1P02549 MIR4435-1-201ENST00000582552 80 ntBASIC3.35□□□□□ -1.87
SPTA1P02549 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SPTA1P02549 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SPTA1P02549 AC083843.2-201ENST00000568248 6253 ntBASIC3.35□□□□□ -1.87
SPTA1P02549 AL079305.1-201ENST00000623159 3008 ntBASIC3.35□□□□□ -1.87
SPTA1P02549 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SPTA1P02549 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SPTA1P02549 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SPTA1P02549 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SPTA1P02549 RN7SKP97-201ENST00000410966 333 ntBASIC3.34□□□□□ -1.87
SPTA1P02549 RPL26P28-201ENST00000451325 435 ntBASIC3.34□□□□□ -1.87
SPTA1P02549 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.34□□□□□ -1.87
SPTA1P02549 AC090602.1-201ENST00000469695 252 ntBASIC3.34□□□□□ -1.87
SPTA1P02549 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.34□□□□□ -1.87
SPTA1P02549 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC3.34□□□□□ -1.87
SPTA1P02549 VN1R78P-201ENST00000597393 564 ntBASIC3.34□□□□□ -1.87
SPTA1P02549 ZNF90P1-201ENST00000480493 1951 ntBASIC3.34□□□□□ -1.87
SPTA1P02549 AC006504.1-201ENST00000562493 3666 ntBASIC3.34□□□□□ -1.87
SPTA1P02549 AL132656.3-201ENST00000606384 1595 ntBASIC3.34□□□□□ -1.87
SPTA1P02549 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SPTA1P02549 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SPTA1P02549 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
SPTA1P02549 SNORA5B-201ENST00000363786 132 ntBASIC3.34□□□□□ -1.87
SPTA1P02549 BMS1P3-201ENST00000372011 932 ntBASIC3.34□□□□□ -1.87
SPTA1P02549 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
SPTA1P02549 MRPS33P4-201ENST00000434892 317 ntBASIC3.34□□□□□ -1.87
SPTA1P02549 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.34□□□□□ -1.87
SPTA1P02549 Z75741.1-201ENST00000446793 314 ntBASIC3.34□□□□□ -1.87
SPTA1P02549 AC005002.1-201ENST00000447458 540 ntBASIC3.34□□□□□ -1.87
SPTA1P02549 CREM-238ENST00000488741 651 ntTSL 2 BASIC3.34□□□□□ -1.87
SPTA1P02549 AC090151.1-201ENST00000520784 730 ntBASIC3.34□□□□□ -1.87
SPTA1P02549 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.34□□□□□ -1.87
SPTA1P02549 MIR3162-201ENST00000581818 82 ntBASIC3.34□□□□□ -1.87
SPTA1P02549 MIR7851-201ENST00000610611 160 ntBASIC3.34□□□□□ -1.87
SPTA1P02549 AP003485.2-201ENST00000623636 610 ntBASIC3.34□□□□□ -1.87
SPTA1P02549 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.34□□□□□ -1.88
SPTA1P02549 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SPTA1P02549 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.34□□□□□ -1.88
SPTA1P02549 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
SPTA1P02549 THAP12P5-201ENST00000405864 2275 ntBASIC3.34□□□□□ -1.88
SPTA1P02549 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SPTA1P02549 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.34□□□□□ -1.88
SPTA1P02549 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SPTA1P02549 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SPTA1P02549 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.33□□□□□ -1.88
SPTA1P02549 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SPTA1P02549 RPL5P18-201ENST00000406671 891 ntBASIC3.33□□□□□ -1.88
SPTA1P02549 AL358178.1-201ENST00000407698 397 ntBASIC3.33□□□□□ -1.88
SPTA1P02549 HSPE1P27-201ENST00000430808 296 ntBASIC3.33□□□□□ -1.88
SPTA1P02549 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.33□□□□□ -1.88
SPTA1P02549 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.33□□□□□ -1.88
SPTA1P02549 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.33□□□□□ -1.88
SPTA1P02549 AC084759.1-201ENST00000561168 290 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms