Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 RNU6-760P-201ENST00000516078 97 ntBASIC3.32□□□□□ -1.88
HLA-DQB1P01920 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.32□□□□□ -1.88
HLA-DQB1P01920 NDUFB9P3-201ENST00000521269 501 ntBASIC3.32□□□□□ -1.88
HLA-DQB1P01920 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DQB1P01920 AL389895.1-201ENST00000554127 252 ntBASIC3.32□□□□□ -1.88
HLA-DQB1P01920 AC084757.1-201ENST00000559987 490 ntBASIC3.32□□□□□ -1.88
HLA-DQB1P01920 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQB1P01920 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DQB1P01920 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DQB1P01920 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DQB1P01920 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQB1P01920 AC090953.1-201ENST00000604305 1092 ntBASIC3.32□□□□□ -1.88
HLA-DQB1P01920 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DQB1P01920 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DQB1P01920 AC145207.9-201ENST00000623802 325 ntBASIC3.32□□□□□ -1.88
HLA-DQB1P01920 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
HLA-DQB1P01920 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQB1P01920 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DQB1P01920 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQB1P01920 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
HLA-DQB1P01920 AC106871.1-201ENST00000568324 3102 ntBASIC3.32□□□□□ -1.88
HLA-DQB1P01920 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQB1P01920 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DQB1P01920 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AC066616.2-201ENST00000559334 1481 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 OR4K17-201ENST00000315543 1032 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 RNU6-532P-201ENST00000384318 107 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 RNU6-225P-201ENST00000384613 103 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AL161909.1-201ENST00000397390 712 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 RNA5SP293-201ENST00000410527 113 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 RPS7P13-201ENST00000413955 498 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AC006989.1-201ENST00000427212 131 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 NDUFA5P10-201ENST00000432147 357 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 TRIM60P13-201ENST00000432350 1283 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AL772161.1-201ENST00000439130 476 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 MTND3P4-201ENST00000453537 303 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AP002345.1-201ENST00000456493 928 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 RPL38P1-201ENST00000460914 211 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 HAUS1P1-201ENST00000505275 832 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AC093720.1-201ENST00000505681 714 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 RNU6-347P-201ENST00000516658 105 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AC087369.1-201ENST00000520775 996 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 CYCSP29-201ENST00000533731 318 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 PSMB7P1-201ENST00000556349 514 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AC106785.3-201ENST00000564064 847 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AC110743.1-201ENST00000584870 478 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AC015802.5-201ENST00000607478 399 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AC020658.4-201ENST00000613987 684 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AC100827.5-201ENST00000615883 426 ntBASIC3.31□□□□□ -1.88
HLA-DQB1P01920 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HLA-DQB1P01920 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DQB1P01920 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DQB1P01920 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
HLA-DQB1P01920 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DQB1P01920 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.3□□□□□ -1.88
HLA-DQB1P01920 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HLA-DQB1P01920 RNA5SP366-201ENST00000365454 123 ntBASIC3.3□□□□□ -1.88
HLA-DQB1P01920 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HLA-DQB1P01920 RNU6-398P-201ENST00000384143 109 ntBASIC3.3□□□□□ -1.88
HLA-DQB1P01920 MIR199A2-201ENST00000385289 110 ntBASIC3.3□□□□□ -1.88
HLA-DQB1P01920 MIR320B1-201ENST00000390209 79 ntBASIC3.3□□□□□ -1.88
HLA-DQB1P01920 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HLA-DQB1P01920 RNA5SP31-201ENST00000411144 127 ntBASIC3.3□□□□□ -1.88
HLA-DQB1P01920 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DQB1P01920 HSPE1P12-201ENST00000412576 301 ntBASIC3.3□□□□□ -1.88
HLA-DQB1P01920 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.3□□□□□ -1.88
HLA-DQB1P01920 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.3□□□□□ -1.88
HLA-DQB1P01920 HIGD1AP12-201ENST00000427832 281 ntBASIC3.3□□□□□ -1.88
HLA-DQB1P01920 AL590623.1-201ENST00000427864 105 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms