Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC037471.2-201ENST00000564941 598 ntBASIC4.35□□□□□ -1.71
PDGFBP01127 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.35□□□□□ -1.71
PDGFBP01127 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDGFBP01127 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDGFBP01127 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDGFBP01127 AL512506.1-201ENST00000613918 449 ntBASIC4.35□□□□□ -1.71
PDGFBP01127 AL354798.1-201ENST00000622505 329 ntBASIC4.35□□□□□ -1.71
PDGFBP01127 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.35□□□□□ -1.71
PDGFBP01127 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.35□□□□□ -1.71
PDGFBP01127 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.35□□□□□ -1.71
PDGFBP01127 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDGFBP01127 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
PDGFBP01127 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.35□□□□□ -1.71
PDGFBP01127 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
PDGFBP01127 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
PDGFBP01127 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
PDGFBP01127 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
PDGFBP01127 AC073346.2-201ENST00000624724 2058 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.34□□□□□ -1.71
PDGFBP01127 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDGFBP01127 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
PDGFBP01127 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
PDGFBP01127 OR11H4-201ENST00000315409 1082 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 RNU6-98P-201ENST00000384173 107 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 MIR218-2-201ENST00000385006 110 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 MIR34B-201ENST00000385076 84 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 MIR634-201ENST00000385208 97 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.34□□□□□ -1.71
PDGFBP01127 Z92545.1-201ENST00000411782 234 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.34□□□□□ -1.71
PDGFBP01127 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.34□□□□□ -1.71
PDGFBP01127 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.34□□□□□ -1.71
PDGFBP01127 GTF3AP5-201ENST00000442645 697 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.34□□□□□ -1.71
PDGFBP01127 ATP5G1P3-201ENST00000463301 410 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 PPIAP15-201ENST00000479662 484 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 AC010374.1-201ENST00000503762 1237 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.34□□□□□ -1.71
PDGFBP01127 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.34□□□□□ -1.71
PDGFBP01127 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.34□□□□□ -1.71
PDGFBP01127 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.34□□□□□ -1.71
PDGFBP01127 SOD1P3-201ENST00000518682 454 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.34□□□□□ -1.71
PDGFBP01127 AC008562.1-201ENST00000521763 330 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDGFBP01127 AC107016.1-201ENST00000550463 337 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.34□□□□□ -1.71
PDGFBP01127 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.34□□□□□ -1.71
PDGFBP01127 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.34□□□□□ -1.71
PDGFBP01127 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.34□□□□□ -1.71
PDGFBP01127 AC027455.1-201ENST00000574104 594 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 AP003117.1-201ENST00000602771 554 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.34□□□□□ -1.71
PDGFBP01127 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 AL021997.2-201ENST00000615674 271 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
PDGFBP01127 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.34□□□□□ -1.71
PDGFBP01127 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.34□□□□□ -1.71
PDGFBP01127 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
PDGFBP01127 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDGFBP01127 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PDGFBP01127 AL355852.1-201ENST00000454081 1771 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 ZNF285B-201ENST00000561698 1767 ntBASIC4.34□□□□□ -1.71
PDGFBP01127 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PDGFBP01127 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
PDGFBP01127 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.34□□□□□ -1.72
PDGFBP01127 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
PDGFBP01127 AL136964.1-201ENST00000622038 2990 ntBASIC4.34□□□□□ -1.72
PDGFBP01127 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.72
PDGFBP01127 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.34□□□□□ -1.72
PDGFBP01127 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
PDGFBP01127 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
PDGFBP01127 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
PDGFBP01127 SCN1A-220ENST00000641603 12506 ntBASIC4.33□□□□□ -1.72
PDGFBP01127 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.33□□□□□ -1.72
PDGFBP01127 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.33□□□□□ -1.72
PDGFBP01127 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PDGFBP01127 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDGFBP01127 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PDGFBP01127 AC008549.2-201ENST00000333482 706 ntBASIC4.33□□□□□ -1.72
PDGFBP01127 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.33□□□□□ -1.72
PDGFBP01127 RNA5SP175-201ENST00000364275 119 ntBASIC4.33□□□□□ -1.72
PDGFBP01127 OR52E6-202ENST00000379946 954 ntBASIC4.33□□□□□ -1.72
PDGFBP01127 AL080315.1-201ENST00000406055 466 ntBASIC4.33□□□□□ -1.72
PDGFBP01127 AL353692.2-201ENST00000407054 335 ntBASIC4.33□□□□□ -1.72
PDGFBP01127 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.33□□□□□ -1.72
PDGFBP01127 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.33□□□□□ -1.72
PDGFBP01127 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.33□□□□□ -1.72
PDGFBP01127 CYCSP43-201ENST00000438233 310 ntBASIC4.33□□□□□ -1.72
PDGFBP01127 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.33□□□□□ -1.72
PDGFBP01127 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.33□□□□□ -1.72
PDGFBP01127 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.33□□□□□ -1.72
PDGFBP01127 RPS4XP15-201ENST00000489210 795 ntBASIC4.33□□□□□ -1.72
PDGFBP01127 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.33□□□□□ -1.72
PDGFBP01127 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.33□□□□□ -1.72
PDGFBP01127 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.33□□□□□ -1.72
PDGFBP01127 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.33□□□□□ -1.72
PDGFBP01127 AC026403.1-201ENST00000518938 295 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms