Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 RPL23AP83-201ENST00000434984 473 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 AC073264.2-201ENST00000448886 166 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.89□□□□□ -1.79
SHOX2O60902 RPL5P32-201ENST00000454085 879 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.89□□□□□ -1.79
SHOX2O60902 TRBV8-2-201ENST00000475637 270 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 LARP7P4-201ENST00000481075 878 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.89□□□□□ -1.79
SHOX2O60902 AC026402.1-201ENST00000513642 170 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 SNORD116-30-201ENST00000516468 85 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.89□□□□□ -1.79
SHOX2O60902 OR8G5-201ENST00000524943 1041 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.89□□□□□ -1.79
SHOX2O60902 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHOX2O60902 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.89□□□□□ -1.79
SHOX2O60902 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.89□□□□□ -1.79
SHOX2O60902 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC3.89□□□□□ -1.79
SHOX2O60902 TGIF1P1-201ENST00000558095 802 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.89□□□□□ -1.79
SHOX2O60902 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHOX2O60902 AC025627.2-201ENST00000576220 160 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.89□□□□□ -1.79
SHOX2O60902 AC010615.3-201ENST00000597319 394 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 OR6R2P-201ENST00000609216 300 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.89□□□□□ -1.79
SHOX2O60902 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.89□□□□□ -1.79
SHOX2O60902 MIR7703-201ENST00000620784 77 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.89□□□□□ -1.79
SHOX2O60902 MIR7153-201ENST00000637758 57 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 OR8B1P-202ENST00000641132 1178 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHOX2O60902 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.89□□□□□ -1.79
SHOX2O60902 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SHOX2O60902 EIF2AP4-201ENST00000424793 1781 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 AL592148.3-201ENST00000608771 2646 ntBASIC3.89□□□□□ -1.79
SHOX2O60902 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHOX2O60902 DHX40P1-201ENST00000588725 1412 ntBASIC3.88□□□□□ -1.79
SHOX2O60902 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SHOX2O60902 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.88□□□□□ -1.79
SHOX2O60902 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHOX2O60902 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SHOX2O60902 OR4K15-201ENST00000305051 1216 ntBASIC3.88□□□□□ -1.79
SHOX2O60902 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.88□□□□□ -1.79
SHOX2O60902 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHOX2O60902 RNA5SP239-201ENST00000410218 129 ntBASIC3.88□□□□□ -1.79
SHOX2O60902 RNA5SP293-201ENST00000410527 113 ntBASIC3.88□□□□□ -1.79
SHOX2O60902 RN7SKP263-201ENST00000411194 309 ntBASIC3.88□□□□□ -1.79
SHOX2O60902 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.88□□□□□ -1.79
SHOX2O60902 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.88□□□□□ -1.79
SHOX2O60902 snoU13.24-201ENST00000458998 104 ntBASIC3.88□□□□□ -1.79
SHOX2O60902 AC093720.1-201ENST00000505681 714 ntBASIC3.88□□□□□ -1.79
SHOX2O60902 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.88□□□□□ -1.79
SHOX2O60902 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.88□□□□□ -1.79
SHOX2O60902 DEFB109D-201ENST00000529497 240 ntBASIC3.88□□□□□ -1.79
SHOX2O60902 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SHOX2O60902 AC025260.1-201ENST00000548858 430 ntBASIC3.88□□□□□ -1.79
SHOX2O60902 AL389895.1-201ENST00000554127 252 ntBASIC3.88□□□□□ -1.79
SHOX2O60902 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.88□□□□□ -1.79
SHOX2O60902 AC068714.1-201ENST00000559623 800 ntBASIC3.88□□□□□ -1.79
SHOX2O60902 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.88□□□□□ -1.79
SHOX2O60902 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.88□□□□□ -1.79
SHOX2O60902 MIR4429-201ENST00000580105 73 ntBASIC3.88□□□□□ -1.79
SHOX2O60902 MIR3124-201ENST00000582636 67 ntBASIC3.88□□□□□ -1.79
SHOX2O60902 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SHOX2O60902 RPL12P25-202ENST00000598100 674 ntBASIC3.88□□□□□ -1.79
SHOX2O60902 AC010857.1-201ENST00000606398 594 ntBASIC3.88□□□□□ -1.79
SHOX2O60902 AC012213.4-201ENST00000606457 354 ntBASIC3.88□□□□□ -1.79
SHOX2O60902 MIR6780A-201ENST00000615089 68 ntBASIC3.88□□□□□ -1.79
SHOX2O60902 AP003497.2-201ENST00000624220 967 ntBASIC3.88□□□□□ -1.79
SHOX2O60902 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.88□□□□□ -1.79
SHOX2O60902 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SHOX2O60902 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.88□□□□□ -1.79
SHOX2O60902 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.88□□□□□ -1.79
SHOX2O60902 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.88□□□□□ -1.79
SHOX2O60902 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHOX2O60902 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.87□□□□□ -1.79
SHOX2O60902 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHOX2O60902 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHOX2O60902 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
SHOX2O60902 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SHOX2O60902 AC079741.1-201ENST00000321498 212 ntBASIC3.87□□□□□ -1.79
SHOX2O60902 RNU1-64P-201ENST00000365443 163 ntBASIC3.87□□□□□ -1.79
SHOX2O60902 RNU6-1279P-201ENST00000383917 103 ntBASIC3.87□□□□□ -1.79
SHOX2O60902 AL034374.1-201ENST00000406329 351 ntBASIC3.87□□□□□ -1.79
SHOX2O60902 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.87□□□□□ -1.79
SHOX2O60902 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.87□□□□□ -1.79
SHOX2O60902 MTCYBP7-201ENST00000419540 1134 ntBASIC3.87□□□□□ -1.79
SHOX2O60902 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SHOX2O60902 HMGB3P5-201ENST00000428894 612 ntBASIC3.87□□□□□ -1.79
SHOX2O60902 BX679664.1-201ENST00000434429 253 ntBASIC3.87□□□□□ -1.79
SHOX2O60902 AC093716.1-201ENST00000435923 377 ntBASIC3.87□□□□□ -1.79
SHOX2O60902 CACYBPP1-201ENST00000438592 684 ntBASIC3.87□□□□□ -1.79
SHOX2O60902 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.87□□□□□ -1.79
SHOX2O60902 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.87□□□□□ -1.79
SHOX2O60902 MTND2P28-201ENST00000457540 1044 ntBASIC3.87□□□□□ -1.79
SHOX2O60902 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.87□□□□□ -1.79
SHOX2O60902 AC092691.2-201ENST00000461787 803 ntBASIC3.87□□□□□ -1.79
SHOX2O60902 AC021205.1-201ENST00000468797 348 ntBASIC3.87□□□□□ -1.79
SHOX2O60902 AC087312.1-201ENST00000471411 480 ntBASIC3.87□□□□□ -1.79
SHOX2O60902 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms