Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC117394.1-201ENST00000477323 567 ntBASIC4.16□□□□□ -1.74
SNX3O60493 AC091959.2-201ENST00000477363 321 ntBASIC4.16□□□□□ -1.74
SNX3O60493 AC015724.1-201ENST00000478577 156 ntBASIC4.16□□□□□ -1.74
SNX3O60493 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SNX3O60493 RPL23AP72-201ENST00000492447 435 ntBASIC4.16□□□□□ -1.74
SNX3O60493 AC023050.1-201ENST00000498198 304 ntBASIC4.16□□□□□ -1.74
SNX3O60493 AC104109.1-201ENST00000498563 436 ntBASIC4.16□□□□□ -1.74
SNX3O60493 AC091860.1-201ENST00000505723 432 ntBASIC4.16□□□□□ -1.74
SNX3O60493 AC147055.3-201ENST00000510547 851 ntBASIC4.16□□□□□ -1.74
SNX3O60493 RN7SKP276-201ENST00000516242 268 ntBASIC4.16□□□□□ -1.74
SNX3O60493 RN7SKP66-201ENST00000516681 231 ntBASIC4.16□□□□□ -1.74
SNX3O60493 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.16□□□□□ -1.74
SNX3O60493 IGKV3D-34-201ENST00000522638 302 ntBASIC4.16□□□□□ -1.74
SNX3O60493 AC021451.1-201ENST00000523498 1129 ntBASIC4.16□□□□□ -1.74
SNX3O60493 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SNX3O60493 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX3O60493 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.16□□□□□ -1.74
SNX3O60493 AC087897.1-201ENST00000550134 156 ntBASIC4.16□□□□□ -1.74
SNX3O60493 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.16□□□□□ -1.74
SNX3O60493 NIFKP8-201ENST00000560500 874 ntBASIC4.16□□□□□ -1.74
SNX3O60493 NF1P5-201ENST00000588287 448 ntBASIC4.16□□□□□ -1.74
SNX3O60493 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.16□□□□□ -1.74
SNX3O60493 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.16□□□□□ -1.74
SNX3O60493 MRPS35P3-201ENST00000603189 709 ntBASIC4.16□□□□□ -1.74
SNX3O60493 Z82195.1-201ENST00000604558 398 ntBASIC4.16□□□□□ -1.74
SNX3O60493 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.16□□□□□ -1.74
SNX3O60493 AP003485.1-201ENST00000625093 753 ntBASIC4.16□□□□□ -1.74
SNX3O60493 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SNX3O60493 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SNX3O60493 PABPC1P6-201ENST00000445594 1829 ntBASIC4.16□□□□□ -1.74
SNX3O60493 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SNX3O60493 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SNX3O60493 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SNX3O60493 AC114546.3-201ENST00000623582 1734 ntBASIC4.15□□□□□ -1.74
SNX3O60493 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SNX3O60493 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SNX3O60493 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SNX3O60493 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
SNX3O60493 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SNX3O60493 OR11H4-201ENST00000315409 1082 ntBASIC4.15□□□□□ -1.75
SNX3O60493 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.15□□□□□ -1.75
SNX3O60493 MIR423-201ENST00000362201 94 ntBASIC4.15□□□□□ -1.75
SNX3O60493 RNU1-18P-201ENST00000363062 164 ntBASIC4.15□□□□□ -1.75
SNX3O60493 RNU6-236P-201ENST00000363886 106 ntBASIC4.15□□□□□ -1.75
SNX3O60493 RNU6-549P-201ENST00000384433 107 ntBASIC4.15□□□□□ -1.75
SNX3O60493 MIR223-201ENST00000385204 110 ntBASIC4.15□□□□□ -1.75
SNX3O60493 HMGN2P8-201ENST00000391458 268 ntBASIC4.15□□□□□ -1.75
SNX3O60493 MIR1179-201ENST00000408703 91 ntBASIC4.15□□□□□ -1.75
SNX3O60493 VN1R51P-201ENST00000411675 945 ntBASIC4.15□□□□□ -1.75
SNX3O60493 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.15□□□□□ -1.75
SNX3O60493 CHEK2P5-201ENST00000423877 246 ntBASIC4.15□□□□□ -1.75
SNX3O60493 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.15□□□□□ -1.75
SNX3O60493 RPL21P110-201ENST00000433345 446 ntBASIC4.15□□□□□ -1.75
SNX3O60493 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.15□□□□□ -1.75
SNX3O60493 RPS26P40-201ENST00000435209 294 ntBASIC4.15□□□□□ -1.75
SNX3O60493 PSMD10P3-201ENST00000437000 448 ntBASIC4.15□□□□□ -1.75
SNX3O60493 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.15□□□□□ -1.75
SNX3O60493 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.15□□□□□ -1.75
SNX3O60493 TVP23BP2-201ENST00000455082 615 ntBASIC4.15□□□□□ -1.75
SNX3O60493 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.15□□□□□ -1.75
SNX3O60493 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.15□□□□□ -1.75
SNX3O60493 COPS8P2-201ENST00000473228 627 ntBASIC4.15□□□□□ -1.75
SNX3O60493 RN7SL174P-201ENST00000475578 289 ntBASIC4.15□□□□□ -1.75
SNX3O60493 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.15□□□□□ -1.75
SNX3O60493 RPL30P11-201ENST00000495304 339 ntBASIC4.15□□□□□ -1.75
SNX3O60493 TPT1P8-201ENST00000510120 555 ntBASIC4.15□□□□□ -1.75
SNX3O60493 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.15□□□□□ -1.75
SNX3O60493 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.15□□□□□ -1.75
SNX3O60493 AC104417.1-201ENST00000523974 751 ntBASIC4.15□□□□□ -1.75
SNX3O60493 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.15□□□□□ -1.75
SNX3O60493 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SNX3O60493 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.15□□□□□ -1.75
SNX3O60493 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.15□□□□□ -1.75
SNX3O60493 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.15□□□□□ -1.75
SNX3O60493 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.15□□□□□ -1.75
SNX3O60493 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.15□□□□□ -1.75
SNX3O60493 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
SNX3O60493 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.15□□□□□ -1.75
SNX3O60493 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
SNX3O60493 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.15□□□□□ -1.75
SNX3O60493 AC093765.1-201ENST00000603758 881 ntBASIC4.15□□□□□ -1.75
SNX3O60493 AC069304.3-201ENST00000603938 1084 ntBASIC4.15□□□□□ -1.75
SNX3O60493 AC073387.2-201ENST00000604797 784 ntBASIC4.15□□□□□ -1.75
SNX3O60493 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.15□□□□□ -1.75
SNX3O60493 VN1R74P-201ENST00000613259 503 ntBASIC4.15□□□□□ -1.75
SNX3O60493 MIR6853-201ENST00000619642 74 ntBASIC4.15□□□□□ -1.75
SNX3O60493 AC091905.4-201ENST00000623432 202 ntBASIC4.15□□□□□ -1.75
SNX3O60493 AC090772.4-201ENST00000623599 362 ntBASIC4.15□□□□□ -1.75
SNX3O60493 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SNX3O60493 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SNX3O60493 HSPA8P1-201ENST00000425843 1833 ntBASIC4.15□□□□□ -1.75
SNX3O60493 AC090971.4-201ENST00000560291 1800 ntBASIC4.15□□□□□ -1.75
SNX3O60493 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SNX3O60493 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.15□□□□□ -1.75
SNX3O60493 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
SNX3O60493 LINC02471-203ENST00000641941 4752 ntBASIC4.15□□□□□ -1.75
SNX3O60493 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.15□□□□□ -1.75
SNX3O60493 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
SNX3O60493 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
SNX3O60493 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms