Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC012519.1-201ENST00000424588 610 ntBASIC4.57□□□□□ -1.68
LDB2O43679 DNAJC19P7-201ENST00000428811 344 ntBASIC4.57□□□□□ -1.68
LDB2O43679 PPIAP13-201ENST00000434706 478 ntBASIC4.57□□□□□ -1.68
LDB2O43679 CEACAMP6-201ENST00000452007 574 ntBASIC4.57□□□□□ -1.68
LDB2O43679 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.57□□□□□ -1.68
LDB2O43679 AC010468.1-201ENST00000461022 817 ntBASIC4.57□□□□□ -1.68
LDB2O43679 AC096741.1-201ENST00000472250 846 ntBASIC4.57□□□□□ -1.68
LDB2O43679 RN7SL481P-201ENST00000477764 299 ntBASIC4.57□□□□□ -1.68
LDB2O43679 CEACAMP10-202ENST00000495431 496 ntBASIC4.57□□□□□ -1.68
LDB2O43679 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.57□□□□□ -1.68
LDB2O43679 OR51K1P-201ENST00000510214 950 ntBASIC4.57□□□□□ -1.68
LDB2O43679 IGKV2D-10-201ENST00000520194 281 ntBASIC4.57□□□□□ -1.68
LDB2O43679 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.57□□□□□ -1.68
LDB2O43679 MTND2P26-201ENST00000528255 1029 ntBASIC4.57□□□□□ -1.68
LDB2O43679 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.57□□□□□ -1.68
LDB2O43679 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.57□□□□□ -1.68
LDB2O43679 AL442163.2-201ENST00000553912 710 ntBASIC4.57□□□□□ -1.68
LDB2O43679 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.57□□□□□ -1.68
LDB2O43679 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.57□□□□□ -1.68
LDB2O43679 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.57□□□□□ -1.68
LDB2O43679 AADACP1-206ENST00000561502 1193 ntBASIC4.57□□□□□ -1.68
LDB2O43679 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.57□□□□□ -1.68
LDB2O43679 AC109446.2-201ENST00000567872 497 ntBASIC4.57□□□□□ -1.68
LDB2O43679 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.57□□□□□ -1.68
LDB2O43679 AC091178.1-203ENST00000584586 279 ntBASIC4.57□□□□□ -1.68
LDB2O43679 HMGB2P1-201ENST00000591146 634 ntBASIC4.57□□□□□ -1.68
LDB2O43679 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.57□□□□□ -1.68
LDB2O43679 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LDB2O43679 AL133338.2-201ENST00000604292 736 ntBASIC4.57□□□□□ -1.68
LDB2O43679 AP003392.5-201ENST00000607857 415 ntBASIC4.57□□□□□ -1.68
LDB2O43679 AC100847.1-201ENST00000611316 481 ntBASIC4.57□□□□□ -1.68
LDB2O43679 MIR7703-201ENST00000620784 77 ntBASIC4.57□□□□□ -1.68
LDB2O43679 AC140113.4-201ENST00000622087 222 ntBASIC4.57□□□□□ -1.68
LDB2O43679 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LDB2O43679 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
LDB2O43679 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.57□□□□□ -1.68
LDB2O43679 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.57□□□□□ -1.68
LDB2O43679 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LDB2O43679 AC108467.2-201ENST00000617640 1597 ntBASIC4.57□□□□□ -1.68
LDB2O43679 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
LDB2O43679 AC006042.3-201ENST00000454684 1469 ntBASIC4.56□□□□□ -1.68
LDB2O43679 EOGT-210ENST00000615922 1931 ntBASIC4.56□□□□□ -1.68
LDB2O43679 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.56□□□□□ -1.68
LDB2O43679 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.56□□□□□ -1.68
LDB2O43679 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
LDB2O43679 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.56□□□□□ -1.68
LDB2O43679 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LDB2O43679 SNORA71.2-201ENST00000364941 134 ntBASIC4.56□□□□□ -1.68
LDB2O43679 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
LDB2O43679 SNORA70F-201ENST00000384142 135 ntBASIC4.56□□□□□ -1.68
LDB2O43679 MIR659-201ENST00000384963 97 ntBASIC4.56□□□□□ -1.68
LDB2O43679 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
LDB2O43679 VDAC2P1-201ENST00000399358 958 ntBASIC4.56□□□□□ -1.68
LDB2O43679 GLULP6-201ENST00000399502 913 ntBASIC4.56□□□□□ -1.68
LDB2O43679 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.56□□□□□ -1.68
LDB2O43679 AP001324.1-201ENST00000428553 399 ntBASIC4.56□□□□□ -1.68
LDB2O43679 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.56□□□□□ -1.68
LDB2O43679 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.56□□□□□ -1.68
LDB2O43679 AC022022.1-201ENST00000430304 178 ntBASIC4.56□□□□□ -1.68
LDB2O43679 FGF7P5-201ENST00000441829 291 ntBASIC4.56□□□□□ -1.68
LDB2O43679 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.56□□□□□ -1.68
LDB2O43679 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.56□□□□□ -1.68
LDB2O43679 ANKRD26P4-201ENST00000455755 950 ntBASIC4.56□□□□□ -1.68
LDB2O43679 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
LDB2O43679 BET1P1-201ENST00000482276 359 ntBASIC4.56□□□□□ -1.68
LDB2O43679 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
LDB2O43679 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.56□□□□□ -1.68
LDB2O43679 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.56□□□□□ -1.68
LDB2O43679 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.56□□□□□ -1.68
LDB2O43679 MTCO3P28-201ENST00000513351 515 ntBASIC4.56□□□□□ -1.68
LDB2O43679 MRPS33P3-201ENST00000513456 322 ntBASIC4.56□□□□□ -1.68
LDB2O43679 MTCO1P47-201ENST00000523889 1271 ntBASIC4.56□□□□□ -1.68
LDB2O43679 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.56□□□□□ -1.68
LDB2O43679 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.56□□□□□ -1.68
LDB2O43679 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.56□□□□□ -1.68
LDB2O43679 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.56□□□□□ -1.68
LDB2O43679 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.56□□□□□ -1.68
LDB2O43679 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.56□□□□□ -1.68
LDB2O43679 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.56□□□□□ -1.68
LDB2O43679 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.56□□□□□ -1.68
LDB2O43679 RPL7P50-201ENST00000600588 727 ntBASIC4.56□□□□□ -1.68
LDB2O43679 AC090181.2-201ENST00000602975 672 ntBASIC4.56□□□□□ -1.68
LDB2O43679 AL109653.1-201ENST00000603091 248 ntBASIC4.56□□□□□ -1.68
LDB2O43679 Z99497.2-201ENST00000603634 310 ntBASIC4.56□□□□□ -1.68
LDB2O43679 AC008966.2-201ENST00000606157 453 ntBASIC4.56□□□□□ -1.68
LDB2O43679 AP000238.1-201ENST00000608759 426 ntBASIC4.56□□□□□ -1.68
LDB2O43679 AC099676.1-201ENST00000608886 657 ntBASIC4.56□□□□□ -1.68
LDB2O43679 AL592148.2-201ENST00000612210 372 ntBASIC4.56□□□□□ -1.68
LDB2O43679 AC004943.3-201ENST00000624116 600 ntBASIC4.56□□□□□ -1.68
LDB2O43679 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.56□□□□□ -1.68
LDB2O43679 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.56□□□□□ -1.68
LDB2O43679 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LDB2O43679 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.56□□□□□ -1.68
LDB2O43679 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LDB2O43679 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LDB2O43679 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LDB2O43679 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LDB2O43679 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LDB2O43679 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.56□□□□□ -1.68
LDB2O43679 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms