Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 PTP4A1P5-201ENST00000420305 455 ntBASIC3.57□□□□□ -1.84
SGCEO43556 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.57□□□□□ -1.84
SGCEO43556 AL353743.4-201ENST00000422653 1547 ntBASIC3.57□□□□□ -1.84
SGCEO43556 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.57□□□□□ -1.84
SGCEO43556 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SGCEO43556 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SGCEO43556 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.57□□□□□ -1.84
SGCEO43556 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.57□□□□□ -1.84
SGCEO43556 KRT19P6-201ENST00000510983 209 ntBASIC3.57□□□□□ -1.84
SGCEO43556 AC021146.1-201ENST00000511202 716 ntBASIC3.57□□□□□ -1.84
SGCEO43556 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.57□□□□□ -1.84
SGCEO43556 RNU6-1308P-201ENST00000516817 103 ntBASIC3.57□□□□□ -1.84
SGCEO43556 AP003730.1-201ENST00000524605 285 ntBASIC3.57□□□□□ -1.84
SGCEO43556 OR4A2P-201ENST00000527276 913 ntBASIC3.57□□□□□ -1.84
SGCEO43556 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.57□□□□□ -1.84
SGCEO43556 MIR5047-201ENST00000579212 100 ntBASIC3.57□□□□□ -1.84
SGCEO43556 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.57□□□□□ -1.84
SGCEO43556 AC006116.5-201ENST00000591936 559 ntBASIC3.57□□□□□ -1.84
SGCEO43556 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.57□□□□□ -1.84
SGCEO43556 AP004372.1-201ENST00000604842 844 ntBASIC3.57□□□□□ -1.84
SGCEO43556 AC114878.2-201ENST00000604863 1251 ntBASIC3.57□□□□□ -1.84
SGCEO43556 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.57□□□□□ -1.84
SGCEO43556 AC015726.3-201ENST00000624501 418 ntBASIC3.57□□□□□ -1.84
SGCEO43556 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.57□□□□□ -1.84
SGCEO43556 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SGCEO43556 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.56□□□□□ -1.84
SGCEO43556 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
SGCEO43556 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SGCEO43556 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SGCEO43556 SNORA56-201ENST00000383966 129 ntBASIC3.56□□□□□ -1.84
SGCEO43556 RNU6-317P-201ENST00000384031 107 ntBASIC3.56□□□□□ -1.84
SGCEO43556 RNU6-328P-201ENST00000390887 106 ntBASIC3.56□□□□□ -1.84
SGCEO43556 MIR1251-201ENST00000408552 70 ntBASIC3.56□□□□□ -1.84
SGCEO43556 SNORA3C-201ENST00000408792 125 ntBASIC3.56□□□□□ -1.84
SGCEO43556 FAR2P2-201ENST00000413041 594 ntBASIC3.56□□□□□ -1.84
SGCEO43556 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SGCEO43556 FAR2P4-202ENST00000425399 584 ntBASIC3.56□□□□□ -1.84
SGCEO43556 COX6CP15-201ENST00000426313 211 ntBASIC3.56□□□□□ -1.84
SGCEO43556 AL358472.1-201ENST00000431295 329 ntBASIC3.56□□□□□ -1.84
SGCEO43556 NDUFA5P10-201ENST00000432147 357 ntBASIC3.56□□□□□ -1.84
SGCEO43556 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.56□□□□□ -1.84
SGCEO43556 AC007563.3-201ENST00000433233 371 ntBASIC3.56□□□□□ -1.84
SGCEO43556 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.56□□□□□ -1.84
SGCEO43556 AL356535.1-201ENST00000440335 398 ntBASIC3.56□□□□□ -1.84
SGCEO43556 RPS4XP4-201ENST00000443195 763 ntBASIC3.56□□□□□ -1.84
SGCEO43556 NUTF2P3-201ENST00000448540 384 ntBASIC3.56□□□□□ -1.84
SGCEO43556 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.56□□□□□ -1.84
SGCEO43556 AC092691.2-201ENST00000461787 803 ntBASIC3.56□□□□□ -1.84
SGCEO43556 RN7SL271P-201ENST00000487601 295 ntBASIC3.56□□□□□ -1.84
SGCEO43556 AC069499.1-201ENST00000489433 509 ntBASIC3.56□□□□□ -1.84
SGCEO43556 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.56□□□□□ -1.84
SGCEO43556 RNU6-1231P-201ENST00000517185 103 ntBASIC3.56□□□□□ -1.84
SGCEO43556 AC008802.1-201ENST00000519121 791 ntBASIC3.56□□□□□ -1.84
SGCEO43556 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.56□□□□□ -1.84
SGCEO43556 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.56□□□□□ -1.84
SGCEO43556 AC138701.1-201ENST00000524329 714 ntBASIC3.56□□□□□ -1.84
SGCEO43556 OR7E10P-201ENST00000526420 991 ntBASIC3.56□□□□□ -1.84
SGCEO43556 PDCL2P2-201ENST00000533651 189 ntBASIC3.56□□□□□ -1.84
SGCEO43556 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.56□□□□□ -1.84
SGCEO43556 AC007599.1-201ENST00000568688 1174 ntBASIC3.56□□□□□ -1.84
SGCEO43556 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.56□□□□□ -1.84
SGCEO43556 MIR3186-201ENST00000577404 85 ntBASIC3.56□□□□□ -1.84
SGCEO43556 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SGCEO43556 KPNA2P3-201ENST00000584190 848 ntBASIC3.56□□□□□ -1.84
SGCEO43556 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.56□□□□□ -1.84
SGCEO43556 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.56□□□□□ -1.84
SGCEO43556 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SGCEO43556 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.56□□□□□ -1.84
SGCEO43556 AL049634.3-201ENST00000604968 457 ntBASIC3.56□□□□□ -1.84
SGCEO43556 AL023583.1-201ENST00000607518 1143 ntBASIC3.56□□□□□ -1.84
SGCEO43556 MIR7973-1-201ENST00000614683 76 ntBASIC3.56□□□□□ -1.84
SGCEO43556 AL589935.2-201ENST00000616471 1231 ntBASIC3.56□□□□□ -1.84
SGCEO43556 AL445567.2-201ENST00000618935 498 ntBASIC3.56□□□□□ -1.84
SGCEO43556 AC095038.2-201ENST00000621464 1070 ntBASIC3.56□□□□□ -1.84
SGCEO43556 AC010608.2-201ENST00000624830 470 ntBASIC3.56□□□□□ -1.84
SGCEO43556 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.56□□□□□ -1.84
SGCEO43556 AL773545.4-201ENST00000637262 310 ntBASIC3.56□□□□□ -1.84
SGCEO43556 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.56□□□□□ -1.84
SGCEO43556 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.56□□□□□ -1.84
SGCEO43556 AL513478.4-201ENST00000641636 310 ntBASIC3.56□□□□□ -1.84
SGCEO43556 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.56□□□□□ -1.84
SGCEO43556 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SGCEO43556 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SGCEO43556 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SGCEO43556 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.55□□□□□ -1.84
SGCEO43556 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SGCEO43556 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SGCEO43556 PRO1804-201ENST00000623780 2050 ntBASIC3.55□□□□□ -1.84
SGCEO43556 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
SGCEO43556 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SGCEO43556 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SGCEO43556 OR11H4-201ENST00000315409 1082 ntBASIC3.55□□□□□ -1.84
SGCEO43556 RNU6-244P-201ENST00000391028 104 ntBASIC3.55□□□□□ -1.84
SGCEO43556 RNU11-4P-201ENST00000391149 133 ntBASIC3.55□□□□□ -1.84
SGCEO43556 RPS27AP11-201ENST00000402798 447 ntBASIC3.55□□□□□ -1.84
SGCEO43556 RN7SKP33-201ENST00000410942 340 ntBASIC3.55□□□□□ -1.84
SGCEO43556 AC016397.1-201ENST00000412463 242 ntBASIC3.55□□□□□ -1.84
SGCEO43556 HSPE1P12-201ENST00000412576 301 ntBASIC3.55□□□□□ -1.84
SGCEO43556 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.55□□□□□ -1.84
SGCEO43556 CHIAP3-201ENST00000423668 1133 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms