Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC008173.1-201ENST00000418901 264 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.68□□□□□ -1.66
SMAD6O43541 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.68□□□□□ -1.66
SMAD6O43541 AL358176.3-201ENST00000420757 454 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 RPL36AP10-201ENST00000421785 322 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.68□□□□□ -1.66
SMAD6O43541 AC012519.1-201ENST00000424588 610 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 AL160175.1-201ENST00000428124 247 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.68□□□□□ -1.66
SMAD6O43541 AL445567.1-201ENST00000439121 144 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 AC000041.1-201ENST00000439655 175 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.68□□□□□ -1.66
SMAD6O43541 TDGF1P1-201ENST00000445734 527 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMAD6O43541 MTND2P19-201ENST00000449129 1012 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 AC005410.1-202ENST00000460347 485 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 STRADBP1-201ENST00000478954 1281 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SMAD6O43541 AC026414.1-201ENST00000504046 698 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.68□□□□□ -1.66
SMAD6O43541 MTCYBP37-201ENST00000510642 1133 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.68□□□□□ -1.66
SMAD6O43541 NDUFB4P12-201ENST00000513465 390 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 AC092593.2-201ENST00000513866 913 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 HMGB1P19-201ENST00000517578 577 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.68□□□□□ -1.66
SMAD6O43541 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.68□□□□□ -1.66
SMAD6O43541 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.68□□□□□ -1.66
SMAD6O43541 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.68□□□□□ -1.66
SMAD6O43541 AC024909.2-201ENST00000553035 286 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.68□□□□□ -1.66
SMAD6O43541 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.68□□□□□ -1.66
SMAD6O43541 AC106734.1-201ENST00000568646 663 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 AP005119.2-201ENST00000579735 1105 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 RPL12P25-202ENST00000598100 674 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 AC080078.2-201ENST00000603766 501 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 OR2AS2P-201ENST00000606902 342 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 AC135507.1-201ENST00000607214 561 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 AL359757.1-201ENST00000623176 255 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 AC067852.7-201ENST00000623270 535 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 AC145207.9-201ENST00000623802 325 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.68□□□□□ -1.66
SMAD6O43541 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.68□□□□□ -1.66
SMAD6O43541 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SMAD6O43541 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.68□□□□□ -1.66
SMAD6O43541 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SMAD6O43541 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.68□□□□□ -1.66
SMAD6O43541 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.68□□□□□ -1.66
SMAD6O43541 AL672167.1-205ENST00000641112 3080 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 AL137100.1-201ENST00000556703 1620 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SMAD6O43541 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMAD6O43541 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SMAD6O43541 ZNF90P1-201ENST00000480493 1951 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 MTND4P34-201ENST00000572715 1371 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SMAD6O43541 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SMAD6O43541 MAPK10-286ENST00000641208 8747 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SMAD6O43541 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.67□□□□□ -1.66
SMAD6O43541 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.67□□□□□ -1.66
SMAD6O43541 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SMAD6O43541 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SMAD6O43541 AC126755.2-208ENST00000327792 462 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 AC138969.1-213ENST00000331436 462 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SMAD6O43541 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 RNU6-304P-201ENST00000364855 107 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 SNORA71.2-201ENST00000364941 134 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.67□□□□□ -1.66
SMAD6O43541 Y_RNA.472-201ENST00000384322 102 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 MIR129-1-201ENST00000384972 72 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 MIR141-201ENST00000384975 95 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 HSPD1P16-201ENST00000402302 394 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 Z98745.1-201ENST00000402553 494 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 ATF1P1-201ENST00000406040 927 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 FCF1P5-201ENST00000406490 482 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.67□□□□□ -1.66
SMAD6O43541 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.67□□□□□ -1.66
SMAD6O43541 UQCRBP1-201ENST00000421129 336 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 RPS27AP7-201ENST00000422792 455 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.67□□□□□ -1.66
SMAD6O43541 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SMAD6O43541 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.67□□□□□ -1.66
SMAD6O43541 DNAJC19P7-201ENST00000428811 344 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 DLGAP5P1-201ENST00000430307 464 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 UBE2D3P4-201ENST00000441973 436 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 EXTL2P1-201ENST00000446218 416 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.67□□□□□ -1.66
SMAD6O43541 Z95152.1-201ENST00000453556 656 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 AL445433.1-201ENST00000457507 257 ntBASIC4.67□□□□□ -1.66
SMAD6O43541 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.67□□□□□ -1.66
SMAD6O43541 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.67□□□□□ -1.66
SMAD6O43541 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.67□□□□□ -1.66
SMAD6O43541 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.67□□□□□ -1.66
SMAD6O43541 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SMAD6O43541 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.67□□□□□ -1.66
SMAD6O43541 AC098799.3-201ENST00000506095 438 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms