Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 PRRC2CP1-201ENST00000404428 159 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 AL139397.2-201ENST00000404529 772 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 MIR1204-201ENST00000408388 67 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC7.12□□□□□ -1.27
HOXA2O43364 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.12□□□□□ -1.27
HOXA2O43364 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 AC083862.1-201ENST00000427378 1242 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.12□□□□□ -1.27
HOXA2O43364 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.12□□□□□ -1.27
HOXA2O43364 MTND2P29-201ENST00000438595 412 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC7.12□□□□□ -1.27
HOXA2O43364 AC005297.2-201ENST00000450430 606 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 RPL12P25-201ENST00000455592 494 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 Y_RNA.654-201ENST00000497848 106 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 TRBVA-201ENST00000498804 316 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 AC092436.1-201ENST00000506450 503 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC7.12□□□□□ -1.27
HOXA2O43364 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC7.12□□□□□ -1.27
HOXA2O43364 AC023442.1-201ENST00000531247 422 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 AP000857.1-201ENST00000532151 543 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC7.12□□□□□ -1.27
HOXA2O43364 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.12□□□□□ -1.27
HOXA2O43364 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC7.12□□□□□ -1.27
HOXA2O43364 AC004232.1-201ENST00000571388 208 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 MIR4502-201ENST00000580432 81 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 AC115085.1-201ENST00000588924 229 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 AC100812.1-201ENST00000607622 580 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 uc_338.34-201ENST00000617467 174 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 AC244100.1-202ENST00000621554 382 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 AL359396.1-201ENST00000623151 2376 ntBASIC7.12□□□□□ -1.27
HOXA2O43364 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
HOXA2O43364 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC7.12□□□□□ -1.27
HOXA2O43364 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
HOXA2O43364 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXA2O43364 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXA2O43364 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC7.11□□□□□ -1.27
HOXA2O43364 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
HOXA2O43364 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXA2O43364 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HOXA2O43364 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC7.11□□□□□ -1.27
HOXA2O43364 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
HOXA2O43364 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HOXA2O43364 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXA2O43364 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXA2O43364 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.11□□□□□ -1.27
HOXA2O43364 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.11□□□□□ -1.27
HOXA2O43364 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.11□□□□□ -1.27
HOXA2O43364 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HOXA2O43364 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HOXA2O43364 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HOXA2O43364 RPL21P50-201ENST00000417698 477 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC7.11□□□□□ -1.27
HOXA2O43364 AC108479.1-201ENST00000431142 427 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 AC003989.1-201ENST00000434569 565 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 TIMM9P1-201ENST00000436122 256 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC7.11□□□□□ -1.27
HOXA2O43364 COX4I1P2-201ENST00000447446 547 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 AC016724.1-201ENST00000453215 421 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 RNU7-180P-201ENST00000459240 63 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC7.11□□□□□ -1.27
HOXA2O43364 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.11□□□□□ -1.27
HOXA2O43364 RNA5SP503-201ENST00000517047 117 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 IGLVIV-64-201ENST00000518581 301 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC7.11□□□□□ -1.27
HOXA2O43364 MTND4P7-201ENST00000523876 130 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.11□□□□□ -1.27
HOXA2O43364 MDM2-233ENST00000545204 398 ntTSL 5 BASIC7.11□□□□□ -1.27
HOXA2O43364 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC7.11□□□□□ -1.27
HOXA2O43364 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC7.11□□□□□ -1.27
HOXA2O43364 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.11□□□□□ -1.27
HOXA2O43364 AL118558.2-201ENST00000556294 238 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC7.11□□□□□ -1.27
HOXA2O43364 AC053481.3-201ENST00000577881 843 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 AC011477.5-201ENST00000586571 259 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 AC005357.1-201ENST00000588399 301 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 AL512605.2-201ENST00000592972 256 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.11□□□□□ -1.27
HOXA2O43364 AL512782.1-201ENST00000603093 364 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 HSPE1P14-201ENST00000605812 302 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 AC012409.4-201ENST00000612923 249 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 AL355480.1-201ENST00000629041 99 ntBASIC7.11□□□□□ -1.27
HOXA2O43364 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC7.11□□□□□ -1.27
HOXA2O43364 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXA2O43364 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HOXA2O43364 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC7.11□□□□□ -1.27
HOXA2O43364 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
HOXA2O43364 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms