Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.08□□□□□ -1.76
SLC28A1O00337 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.07□□□□□ -1.76
SLC28A1O00337 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
SLC28A1O00337 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.07□□□□□ -1.76
SLC28A1O00337 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.07□□□□□ -1.76
SLC28A1O00337 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SLC28A1O00337 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
SLC28A1O00337 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SLC28A1O00337 NSRP1P1-201ENST00000444067 1693 ntBASIC4.07□□□□□ -1.76
SLC28A1O00337 AC090229.1-201ENST00000590983 1609 ntBASIC4.07□□□□□ -1.76
SLC28A1O00337 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SLC28A1O00337 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SLC28A1O00337 MIR129-1-201ENST00000384972 72 ntBASIC4.07□□□□□ -1.76
SLC28A1O00337 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SLC28A1O00337 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SLC28A1O00337 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.07□□□□□ -1.76
SLC28A1O00337 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.07□□□□□ -1.76
SLC28A1O00337 AL139128.1-201ENST00000413921 941 ntBASIC4.07□□□□□ -1.76
SLC28A1O00337 DEFB130D-201ENST00000426866 237 ntBASIC4.07□□□□□ -1.76
SLC28A1O00337 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.07□□□□□ -1.76
SLC28A1O00337 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.07□□□□□ -1.76
SLC28A1O00337 HSFY3P-201ENST00000444242 1191 ntBASIC4.07□□□□□ -1.76
SLC28A1O00337 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.07□□□□□ -1.76
SLC28A1O00337 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.07□□□□□ -1.76
SLC28A1O00337 RPS29P19-201ENST00000479709 171 ntBASIC4.07□□□□□ -1.76
SLC28A1O00337 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.07□□□□□ -1.76
SLC28A1O00337 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.07□□□□□ -1.76
SLC28A1O00337 AL592156.1-201ENST00000508758 304 ntBASIC4.07□□□□□ -1.76
SLC28A1O00337 HNRNPKP5-201ENST00000515300 253 ntBASIC4.07□□□□□ -1.76
SLC28A1O00337 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SLC28A1O00337 IGLVIV-65-201ENST00000517313 360 ntBASIC4.07□□□□□ -1.76
SLC28A1O00337 MTND2P7-201ENST00000521337 640 ntBASIC4.07□□□□□ -1.76
SLC28A1O00337 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.07□□□□□ -1.76
SLC28A1O00337 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.07□□□□□ -1.76
SLC28A1O00337 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.07□□□□□ -1.76
SLC28A1O00337 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.07□□□□□ -1.76
SLC28A1O00337 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.07□□□□□ -1.76
SLC28A1O00337 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.07□□□□□ -1.76
SLC28A1O00337 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.07□□□□□ -1.76
SLC28A1O00337 RN7SL622P-201ENST00000585292 275 ntBASIC4.07□□□□□ -1.76
SLC28A1O00337 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.07□□□□□ -1.76
SLC28A1O00337 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.07□□□□□ -1.76
SLC28A1O00337 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.07□□□□□ -1.76
SLC28A1O00337 MIR6864-201ENST00000617935 70 ntBASIC4.07□□□□□ -1.76
SLC28A1O00337 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.07□□□□□ -1.76
SLC28A1O00337 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SLC28A1O00337 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
SLC28A1O00337 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SLC28A1O00337 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SLC28A1O00337 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.06□□□□□ -1.76
SLC28A1O00337 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SLC28A1O00337 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
SLC28A1O00337 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SLC28A1O00337 MTCO1P6-201ENST00000481192 1384 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SLC28A1O00337 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.06□□□□□ -1.76
SLC28A1O00337 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SLC28A1O00337 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SLC28A1O00337 SNORA63.3-201ENST00000362682 132 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 RNU6-984P-201ENST00000363236 109 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
SLC28A1O00337 RNA5SP332-201ENST00000391063 115 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.06□□□□□ -1.76
SLC28A1O00337 PRRC2CP1-201ENST00000404428 159 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 RPS16P5-201ENST00000406501 404 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 JKAMPP1-201ENST00000413804 919 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC28A1O00337 RPL23AP1-201ENST00000428990 471 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 NANOGP6-201ENST00000429190 847 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC28A1O00337 GSTA7P-201ENST00000438425 448 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC28A1O00337 RPL23AP52-201ENST00000439311 478 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC28A1O00337 RPS26P30-201ENST00000443431 335 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC28A1O00337 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC28A1O00337 RPL7P32-201ENST00000457119 744 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.06□□□□□ -1.76
SLC28A1O00337 RPS4XP6-201ENST00000477670 797 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.06□□□□□ -1.76
SLC28A1O00337 RN7SL810P-201ENST00000493031 276 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.06□□□□□ -1.76
SLC28A1O00337 HPRT1P2-201ENST00000505250 544 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 AC025554.1-201ENST00000505641 188 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 AC008885.2-201ENST00000509506 930 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 AC005351.1-201ENST00000511152 786 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 RN7SKP96-201ENST00000516948 297 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
SLC28A1O00337 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC28A1O00337 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC28A1O00337 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.06□□□□□ -1.76
SLC28A1O00337 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC28A1O00337 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC28A1O00337 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC28A1O00337 AC051619.2-201ENST00000559063 397 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 RPL12P25-202ENST00000598100 674 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 BNIP3P19-201ENST00000605397 577 ntBASIC4.06□□□□□ -1.76
SLC28A1O00337 AC012603.1-201ENST00000606424 528 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms