Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL353597.2-202ENST00000434901 373 ntBASIC3.6□□□□□ -1.83
UPK1AO00322 Z74696.2-201ENST00000436514 498 ntBASIC3.6□□□□□ -1.83
UPK1AO00322 RPL21P89-201ENST00000444021 467 ntBASIC3.6□□□□□ -1.83
UPK1AO00322 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.6□□□□□ -1.83
UPK1AO00322 AL157884.3-201ENST00000448273 1184 ntBASIC3.6□□□□□ -1.83
UPK1AO00322 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.6□□□□□ -1.83
UPK1AO00322 CALM1P2-201ENST00000452941 448 ntBASIC3.6□□□□□ -1.83
UPK1AO00322 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.6□□□□□ -1.83
UPK1AO00322 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.6□□□□□ -1.83
UPK1AO00322 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.6□□□□□ -1.83
UPK1AO00322 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.6□□□□□ -1.83
UPK1AO00322 AC008489.1-201ENST00000524271 483 ntBASIC3.6□□□□□ -1.83
UPK1AO00322 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
UPK1AO00322 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.6□□□□□ -1.83
UPK1AO00322 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.6□□□□□ -1.83
UPK1AO00322 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.6□□□□□ -1.83
UPK1AO00322 MIR4738-201ENST00000579134 87 ntBASIC3.6□□□□□ -1.83
UPK1AO00322 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.6□□□□□ -1.83
UPK1AO00322 AC110741.2-201ENST00000605278 268 ntBASIC3.6□□□□□ -1.83
UPK1AO00322 uc_338.32-201ENST00000615087 172 ntBASIC3.6□□□□□ -1.83
UPK1AO00322 ZYXP1-201ENST00000617638 118 ntBASIC3.6□□□□□ -1.83
UPK1AO00322 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
UPK1AO00322 OR6C71P-202ENST00000641886 1107 ntBASIC3.6□□□□□ -1.83
UPK1AO00322 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
UPK1AO00322 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
UPK1AO00322 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.6□□□□□ -1.83
UPK1AO00322 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
UPK1AO00322 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.6□□□□□ -1.83
UPK1AO00322 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
UPK1AO00322 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
UPK1AO00322 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
UPK1AO00322 RNU6-213P-201ENST00000384051 104 ntBASIC3.59□□□□□ -1.83
UPK1AO00322 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.59□□□□□ -1.83
UPK1AO00322 CASKP1-201ENST00000412870 582 ntBASIC3.59□□□□□ -1.83
UPK1AO00322 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.59□□□□□ -1.83
UPK1AO00322 AC114814.2-201ENST00000419195 485 ntBASIC3.59□□□□□ -1.83
UPK1AO00322 RPS20P1-201ENST00000434853 354 ntBASIC3.59□□□□□ -1.83
UPK1AO00322 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.59□□□□□ -1.83
UPK1AO00322 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.59□□□□□ -1.83
UPK1AO00322 OR7L1P-201ENST00000456181 380 ntBASIC3.59□□□□□ -1.83
UPK1AO00322 AC020593.1-201ENST00000507399 299 ntBASIC3.59□□□□□ -1.83
UPK1AO00322 RN7SKP209-201ENST00000516888 304 ntBASIC3.59□□□□□ -1.83
UPK1AO00322 AC008802.1-201ENST00000519121 791 ntBASIC3.59□□□□□ -1.83
UPK1AO00322 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.59□□□□□ -1.83
UPK1AO00322 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.59□□□□□ -1.83
UPK1AO00322 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
UPK1AO00322 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.59□□□□□ -1.83
UPK1AO00322 AC007424.1-203ENST00000554613 687 ntBASIC3.59□□□□□ -1.83
UPK1AO00322 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
UPK1AO00322 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC3.59□□□□□ -1.83
UPK1AO00322 AC015726.1-201ENST00000602353 681 ntBASIC3.59□□□□□ -1.83
UPK1AO00322 AL606490.9-201ENST00000603331 271 ntBASIC3.59□□□□□ -1.83
UPK1AO00322 AC123786.2-201ENST00000603459 275 ntBASIC3.59□□□□□ -1.83
UPK1AO00322 OR6R2P-201ENST00000609216 300 ntBASIC3.59□□□□□ -1.83
UPK1AO00322 AP006248.2-201ENST00000623309 592 ntBASIC3.59□□□□□ -1.83
UPK1AO00322 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.59□□□□□ -1.83
UPK1AO00322 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.59□□□□□ -1.83
UPK1AO00322 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.59□□□□□ -1.83
UPK1AO00322 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
UPK1AO00322 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
UPK1AO00322 TNPO1P3-201ENST00000436471 2662 ntBASIC3.58□□□□□ -1.84
UPK1AO00322 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
UPK1AO00322 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
UPK1AO00322 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
UPK1AO00322 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
UPK1AO00322 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
UPK1AO00322 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.58□□□□□ -1.84
UPK1AO00322 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.58□□□□□ -1.84
UPK1AO00322 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
UPK1AO00322 FAM91A3P-201ENST00000456826 2544 ntBASIC3.58□□□□□ -1.84
UPK1AO00322 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
UPK1AO00322 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
UPK1AO00322 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.58□□□□□ -1.84
UPK1AO00322 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.58□□□□□ -1.84
UPK1AO00322 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.58□□□□□ -1.84
UPK1AO00322 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.58□□□□□ -1.84
UPK1AO00322 RNU6-1231P-201ENST00000517185 103 ntBASIC3.58□□□□□ -1.84
UPK1AO00322 MIR2116-201ENST00000517221 80 ntBASIC3.58□□□□□ -1.84
UPK1AO00322 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.58□□□□□ -1.84
UPK1AO00322 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.58□□□□□ -1.84
UPK1AO00322 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.58□□□□□ -1.84
UPK1AO00322 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
UPK1AO00322 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.58□□□□□ -1.84
UPK1AO00322 AC007224.1-201ENST00000564410 144 ntBASIC3.58□□□□□ -1.84
UPK1AO00322 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.58□□□□□ -1.84
UPK1AO00322 AC244505.7-201ENST00000599675 272 ntBASIC3.58□□□□□ -1.84
UPK1AO00322 AL137849.1-201ENST00000604767 169 ntBASIC3.58□□□□□ -1.84
UPK1AO00322 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.58□□□□□ -1.84
UPK1AO00322 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.58□□□□□ -1.84
UPK1AO00322 MIR6810-201ENST00000622701 70 ntBASIC3.58□□□□□ -1.84
UPK1AO00322 AF001550.2-201ENST00000636643 217 ntBASIC3.58□□□□□ -1.84
UPK1AO00322 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.58□□□□□ -1.84
UPK1AO00322 SYT14P1-202ENST00000600441 1448 ntBASIC3.58□□□□□ -1.84
UPK1AO00322 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
UPK1AO00322 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.58□□□□□ -1.84
UPK1AO00322 AC087565.3-202ENST00000642085 1603 ntBASIC3.58□□□□□ -1.84
UPK1AO00322 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
UPK1AO00322 MAPK10-373ENST00000641983 6772 ntBASIC3.58□□□□□ -1.84
UPK1AO00322 AC073073.2-201ENST00000609827 2578 ntBASIC3.57□□□□□ -1.84
UPK1AO00322 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms