Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC092079.1-201ENST00000558620 1985 ntBASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 CEP170P1-201ENST00000502249 4587 ntBASIC3.8□□□□□ -1.8
TRIM49D1C9J1S8 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 CASC19-284ENST00000642142 1868 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 MTND4P10-201ENST00000446199 1363 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 RPL32P3-201ENST00000359025 275 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 RNU6-697P-201ENST00000363348 107 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 SNORA62-201ENST00000365493 153 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 HSPD1P16-201ENST00000402302 394 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AC114814.2-201ENST00000419195 485 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 CR848007.2-201ENST00000424918 787 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AC002075.2-201ENST00000425207 252 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AC073143.1-201ENST00000436316 395 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 RPL12P46-201ENST00000436610 195 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 MTND4P15-201ENST00000437913 1033 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 RPS23P7-201ENST00000466210 444 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 RPS3AP6-201ENST00000484430 795 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AC021146.1-201ENST00000511202 716 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AC008489.1-201ENST00000524271 483 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 FAM106CP-201ENST00000582212 507 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AC012213.4-201ENST00000606457 354 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AL158211.2-201ENST00000607282 395 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AL445423.1-201ENST00000609941 536 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 AP000756.2-201ENST00000624168 2567 ntBASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM49D1C9J1S8 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 MIR7-1-201ENST00000384871 110 ntBASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 OR6C69P-201ENST00000394268 893 ntBASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 RPL30P2-201ENST00000414021 291 ntBASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 AC093698.1-201ENST00000423843 571 ntBASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 MTCO1P57-201ENST00000432182 261 ntBASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 TPT1P12-201ENST00000448968 492 ntBASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 AC005229.2-201ENST00000456995 399 ntBASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 AC022336.1-201ENST00000475510 337 ntBASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 SNORA70.17-201ENST00000516449 133 ntBASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 SEC11B-201ENST00000518383 499 ntBASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TRIM49D1C9J1S8 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms