Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TMEM248P1-201ENST00000510579 951 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 RN7SKP196-201ENST00000516267 345 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AC090572.1-201ENST00000519251 160 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 OR4R1P-201ENST00000529879 463 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AC005519.1-201ENST00000554490 601 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 RN7SL426P-201ENST00000579106 295 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AC010525.2-201ENST00000590920 195 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AL591167.1-201ENST00000607321 456 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AC093913.1-201ENST00000614178 329 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 RIOK3P1-201ENST00000418778 1528 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 AC024587.1-201ENST00000505925 2157 ntBASIC5.36□□□□□ -1.55
SHISA3A0PJX4 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHISA3A0PJX4 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 ADAM24P-201ENST00000398655 2101 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 MTND4P27-201ENST00000450813 1354 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 NACAP2-201ENST00000318548 624 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 RNA5SP453-201ENST00000362503 119 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 Y_RNA.138-201ENST00000363462 102 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AL592293.2-201ENST00000422292 996 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 IFNA20P-201ENST00000436840 528 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 RPS26P56-201ENST00000444468 240 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 GAPDHP23-201ENST00000444823 993 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AL356010.1-201ENST00000456364 102 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AP000893.1-201ENST00000474462 794 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 SNRPCP3-201ENST00000474888 476 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 RPS3AP50-201ENST00000487064 803 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AC018645.1-201ENST00000505003 109 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 RNU6-410P-201ENST00000517006 107 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AC107934.1-201ENST00000522215 217 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AC130366.1-201ENST00000526505 1192 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 OR4T1P-201ENST00000554933 911 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AL356432.3-201ENST00000568952 465 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AL355816.1-201ENST00000607951 118 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 MIR6070-201ENST00000613967 103 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.35□□□□□ -1.55
SHISA3A0PJX4 AC016583.1-201ENST00000624221 2431 ntBASIC5.35□□□□□ -1.55
SHISA3A0PJX4 XPOTP1-201ENST00000443317 2398 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms