Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Chchd1Q9CQA6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Chchd1Q9CQA6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Gm10418-201ENSMUST00000100943 576 ntBASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Chchd1Q9CQA6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Chchd1Q9CQA6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.54□□□□□ -0.4
Chchd1Q9CQA6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms