Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
ABCA3Q99758 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
ABCA3Q99758 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ABCA3Q99758 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC25.85■■□□□ 1.73
ABCA3Q99758 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
ABCA3Q99758 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC25.85■■□□□ 1.73
ABCA3Q99758 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ABCA3Q99758 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ABCA3Q99758 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC25.85■■□□□ 1.73
ABCA3Q99758 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC25.85■■□□□ 1.73
ABCA3Q99758 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC25.85■■□□□ 1.73
ABCA3Q99758 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC25.85■■□□□ 1.73
ABCA3Q99758 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ABCA3Q99758 BID-212ENST00000614949 1988 ntTSL 5 BASIC25.85■■□□□ 1.73
ABCA3Q99758 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ABCA3Q99758 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC25.85■■□□□ 1.73
ABCA3Q99758 AC106795.1-205ENST00000512851 1056 ntBASIC25.85■■□□□ 1.73
ABCA3Q99758 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ABCA3Q99758 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC25.85■■□□□ 1.73
ABCA3Q99758 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC25.85■■□□□ 1.73
ABCA3Q99758 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
ABCA3Q99758 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ABCA3Q99758 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
ABCA3Q99758 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
ABCA3Q99758 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC25.84■■□□□ 1.73
ABCA3Q99758 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC25.84■■□□□ 1.73
ABCA3Q99758 BUB3-202ENST00000368859 667 ntTSL 3 BASIC25.84■■□□□ 1.73
ABCA3Q99758 SEC1P-202ENST00000473944 940 ntBASIC25.84■■□□□ 1.73
ABCA3Q99758 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC25.84■■□□□ 1.73
ABCA3Q99758 GPALPP1-207ENST00000611650 899 ntBASIC25.84■■□□□ 1.73
ABCA3Q99758 AC120114.3-201ENST00000611923 658 ntBASIC25.84■■□□□ 1.73
ABCA3Q99758 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
ABCA3Q99758 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC25.84■■□□□ 1.73
ABCA3Q99758 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC25.84■■□□□ 1.73
ABCA3Q99758 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ABCA3Q99758 AL117328.2-201ENST00000624617 1940 ntBASIC25.83■■□□□ 1.73
ABCA3Q99758 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
ABCA3Q99758 TSPY19P-201ENST00000418461 509 ntBASIC25.83■■□□□ 1.73
ABCA3Q99758 TSPY18P-201ENST00000441642 509 ntBASIC25.83■■□□□ 1.73
ABCA3Q99758 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC25.83■■□□□ 1.73
ABCA3Q99758 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC25.83■■□□□ 1.73
ABCA3Q99758 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ABCA3Q99758 AL162741.1-201ENST00000565563 1558 ntBASIC25.83■■□□□ 1.73
ABCA3Q99758 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
ABCA3Q99758 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC25.83■■□□□ 1.72
ABCA3Q99758 HLA-F-220ENST00000434407 884 ntBASIC25.83■■□□□ 1.72
ABCA3Q99758 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC25.83■■□□□ 1.72
ABCA3Q99758 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.72
ABCA3Q99758 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC25.83■■□□□ 1.72
ABCA3Q99758 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
ABCA3Q99758 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC25.83■■□□□ 1.72
ABCA3Q99758 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
ABCA3Q99758 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ABCA3Q99758 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC25.82■■□□□ 1.72
ABCA3Q99758 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ABCA3Q99758 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ABCA3Q99758 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ABCA3Q99758 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC25.82■■□□□ 1.72
ABCA3Q99758 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ABCA3Q99758 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC25.82■■□□□ 1.72
ABCA3Q99758 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.72
ABCA3Q99758 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC25.82■■□□□ 1.72
ABCA3Q99758 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
ABCA3Q99758 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
ABCA3Q99758 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC25.81■■□□□ 1.72
ABCA3Q99758 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ABCA3Q99758 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ABCA3Q99758 AP002469.2-201ENST00000531724 424 ntBASIC25.81■■□□□ 1.72
ABCA3Q99758 KRT8P26-201ENST00000534154 1276 ntBASIC25.81■■□□□ 1.72
ABCA3Q99758 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ABCA3Q99758 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
ABCA3Q99758 GPAT2P1-201ENST00000444924 1672 ntBASIC25.81■■□□□ 1.72
ABCA3Q99758 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ABCA3Q99758 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ABCA3Q99758 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ABCA3Q99758 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC25.8■■□□□ 1.72
ABCA3Q99758 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
ABCA3Q99758 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ABCA3Q99758 DRAXINP1-201ENST00000437611 948 ntBASIC25.8■■□□□ 1.72
ABCA3Q99758 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ABCA3Q99758 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC25.8■■□□□ 1.72
ABCA3Q99758 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC25.8■■□□□ 1.72
ABCA3Q99758 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ABCA3Q99758 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.8■■□□□ 1.72
ABCA3Q99758 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ABCA3Q99758 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ABCA3Q99758 MRPL3P1-201ENST00000400109 1033 ntBASIC25.8■■□□□ 1.72
ABCA3Q99758 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC25.8■■□□□ 1.72
ABCA3Q99758 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC25.8■■□□□ 1.72
ABCA3Q99758 AC079602.3-201ENST00000623931 403 ntBASIC25.8■■□□□ 1.72
ABCA3Q99758 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC25.8■■□□□ 1.72
ABCA3Q99758 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
ABCA3Q99758 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
ABCA3Q99758 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC25.79■■□□□ 1.72
ABCA3Q99758 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC25.79■■□□□ 1.72
ABCA3Q99758 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
ABCA3Q99758 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
ABCA3Q99758 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
ABCA3Q99758 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ABCA3Q99758 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms