Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trim29Q8R2Q0 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.89■□□□□ 0.61
Trim29Q8R2Q0 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.89■□□□□ 0.61
Trim29Q8R2Q0 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim29Q8R2Q0 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.89■□□□□ 0.61
Trim29Q8R2Q0 Gm18115-201ENSMUST00000221209 621 ntBASIC18.89■□□□□ 0.61
Trim29Q8R2Q0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim29Q8R2Q0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim29Q8R2Q0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trim29Q8R2Q0 Actl10-202ENSMUST00000226583 1501 ntBASIC18.89■□□□□ 0.61
Trim29Q8R2Q0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim29Q8R2Q0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim29Q8R2Q0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim29Q8R2Q0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trim29Q8R2Q0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim29Q8R2Q0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trim29Q8R2Q0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trim29Q8R2Q0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim29Q8R2Q0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Trim29Q8R2Q0 Mir1668-201ENSMUST00000184114 107 ntBASIC18.87■□□□□ 0.61
Trim29Q8R2Q0 Phf7-203ENSMUST00000226565 1971 ntBASIC18.87■□□□□ 0.61
Trim29Q8R2Q0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim29Q8R2Q0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim29Q8R2Q0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.87■□□□□ 0.61
Trim29Q8R2Q0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trim29Q8R2Q0 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trim29Q8R2Q0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim29Q8R2Q0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim29Q8R2Q0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Trim29Q8R2Q0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim29Q8R2Q0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim29Q8R2Q0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim29Q8R2Q0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim29Q8R2Q0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim29Q8R2Q0 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim29Q8R2Q0 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.86■□□□□ 0.61
Trim29Q8R2Q0 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.86■□□□□ 0.61
Trim29Q8R2Q0 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.86■□□□□ 0.61
Trim29Q8R2Q0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim29Q8R2Q0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim29Q8R2Q0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim29Q8R2Q0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim29Q8R2Q0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim29Q8R2Q0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Gm6433-201ENSMUST00000118634 875 ntBASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim29Q8R2Q0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trim29Q8R2Q0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms