Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL22A1Q8NFW1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL22A1Q8NFW1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL22A1Q8NFW1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC25.93■■□□□ 1.74
COL22A1Q8NFW1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL22A1Q8NFW1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
COL22A1Q8NFW1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL22A1Q8NFW1 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
COL22A1Q8NFW1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 FP700111.2-201ENST00000619190 1892 ntBASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 KRT18P13-201ENST00000400056 1290 ntBASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 AC117500.6-201ENST00000624871 588 ntBASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 FOSL1P1-201ENST00000511041 816 ntBASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
COL22A1Q8NFW1 FEM1AP1-201ENST00000431297 1995 ntBASIC25.91■■□□□ 1.74
COL22A1Q8NFW1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
COL22A1Q8NFW1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL22A1Q8NFW1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC25.91■■□□□ 1.74
COL22A1Q8NFW1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC25.91■■□□□ 1.74
COL22A1Q8NFW1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
COL22A1Q8NFW1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC25.91■■□□□ 1.74
COL22A1Q8NFW1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC25.91■■□□□ 1.74
COL22A1Q8NFW1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC25.91■■□□□ 1.74
COL22A1Q8NFW1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC25.91■■□□□ 1.74
COL22A1Q8NFW1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC25.91■■□□□ 1.74
COL22A1Q8NFW1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL22A1Q8NFW1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC25.91■■□□□ 1.74
COL22A1Q8NFW1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
COL22A1Q8NFW1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL22A1Q8NFW1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
COL22A1Q8NFW1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC25.9■■□□□ 1.74
COL22A1Q8NFW1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL22A1Q8NFW1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC25.9■■□□□ 1.74
COL22A1Q8NFW1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL22A1Q8NFW1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL22A1Q8NFW1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC25.9■■□□□ 1.74
COL22A1Q8NFW1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL22A1Q8NFW1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC25.9■■□□□ 1.74
COL22A1Q8NFW1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL22A1Q8NFW1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC25.9■■□□□ 1.74
COL22A1Q8NFW1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC25.9■■□□□ 1.74
COL22A1Q8NFW1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC25.9■■□□□ 1.74
COL22A1Q8NFW1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC25.9■■□□□ 1.74
COL22A1Q8NFW1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL22A1Q8NFW1 NME4-212ENST00000621774 904 ntTSL 3 BASIC25.9■■□□□ 1.74
COL22A1Q8NFW1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL22A1Q8NFW1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC25.9■■□□□ 1.74
COL22A1Q8NFW1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL22A1Q8NFW1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
COL22A1Q8NFW1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
COL22A1Q8NFW1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC25.9■■□□□ 1.74
COL22A1Q8NFW1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
COL22A1Q8NFW1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
COL22A1Q8NFW1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
COL22A1Q8NFW1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
COL22A1Q8NFW1 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC25.89■■□□□ 1.74
COL22A1Q8NFW1 AC091304.2-201ENST00000564639 760 ntBASIC25.89■■□□□ 1.74
COL22A1Q8NFW1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC25.89■■□□□ 1.74
COL22A1Q8NFW1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
COL22A1Q8NFW1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC25.89■■□□□ 1.74
COL22A1Q8NFW1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC25.89■■□□□ 1.74
COL22A1Q8NFW1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
COL22A1Q8NFW1 AC092720.2-201ENST00000602388 1665 ntBASIC25.89■■□□□ 1.74
COL22A1Q8NFW1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.73
COL22A1Q8NFW1 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.73
COL22A1Q8NFW1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
COL22A1Q8NFW1 AC233723.2-201ENST00000623798 2106 ntBASIC25.89■■□□□ 1.73
COL22A1Q8NFW1 BID-203ENST00000399765 1879 ntTSL 2 BASIC25.89■■□□□ 1.73
COL22A1Q8NFW1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC25.89■■□□□ 1.73
COL22A1Q8NFW1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
COL22A1Q8NFW1 TSPY22P-201ENST00000427496 604 ntBASIC25.88■■□□□ 1.73
COL22A1Q8NFW1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
COL22A1Q8NFW1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC25.88■■□□□ 1.73
COL22A1Q8NFW1 AP000867.3-201ENST00000524675 377 ntBASIC25.88■■□□□ 1.73
COL22A1Q8NFW1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC25.88■■□□□ 1.73
COL22A1Q8NFW1 TP73-AS1-207ENST00000624167 988 ntBASIC25.88■■□□□ 1.73
COL22A1Q8NFW1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL22A1Q8NFW1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
COL22A1Q8NFW1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL22A1Q8NFW1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
COL22A1Q8NFW1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL22A1Q8NFW1 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms