Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC65Q8IXS2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.47■■□□□ 1.03
CCDC65Q8IXS2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC65Q8IXS2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC65Q8IXS2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC65Q8IXS2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC65Q8IXS2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CCDC65Q8IXS2 C1QBPP2-201ENST00000528754 825 ntBASIC21.47■■□□□ 1.03
CCDC65Q8IXS2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.47■■□□□ 1.03
CCDC65Q8IXS2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.47■■□□□ 1.03
CCDC65Q8IXS2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC65Q8IXS2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC65Q8IXS2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC65Q8IXS2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC65Q8IXS2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC65Q8IXS2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CCDC65Q8IXS2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CCDC65Q8IXS2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 ITM2C-210ENST00000620962 501 ntBASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC65Q8IXS2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
CCDC65Q8IXS2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.45■■□□□ 1.03
CCDC65Q8IXS2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.03
CCDC65Q8IXS2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.45■■□□□ 1.03
CCDC65Q8IXS2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CCDC65Q8IXS2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC65Q8IXS2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC65Q8IXS2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.45■■□□□ 1.02
CCDC65Q8IXS2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC65Q8IXS2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC65Q8IXS2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC65Q8IXS2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC65Q8IXS2 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC65Q8IXS2 KRT18P29-201ENST00000397031 1267 ntBASIC21.45■■□□□ 1.02
CCDC65Q8IXS2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC65Q8IXS2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.45■■□□□ 1.02
CCDC65Q8IXS2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.45■■□□□ 1.02
CCDC65Q8IXS2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC65Q8IXS2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC65Q8IXS2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC65Q8IXS2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC65Q8IXS2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CCDC65Q8IXS2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
CCDC65Q8IXS2 SDHAP1-207ENST00000440850 2000 ntBASIC21.45■■□□□ 1.02
CCDC65Q8IXS2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC65Q8IXS2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC65Q8IXS2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms