Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zc3hc1Q80YV2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zc3hc1Q80YV2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zc3hc1Q80YV2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zc3hc1Q80YV2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Zc3hc1Q80YV2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zc3hc1Q80YV2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zc3hc1Q80YV2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zc3hc1Q80YV2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Zc3hc1Q80YV2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Zc3hc1Q80YV2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Zc3hc1Q80YV2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3hc1Q80YV2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3hc1Q80YV2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3hc1Q80YV2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3hc1Q80YV2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.14■□□□□ 0.01
Zc3hc1Q80YV2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3hc1Q80YV2 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3hc1Q80YV2 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.14■□□□□ 0.01
Zc3hc1Q80YV2 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3hc1Q80YV2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3hc1Q80YV2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.14■□□□□ 0.01
Zc3hc1Q80YV2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Zc3hc1Q80YV2 Gm18666-201ENSMUST00000190039 958 ntBASIC15.14■□□□□ 0.01
Zc3hc1Q80YV2 Gm43183-201ENSMUST00000200632 547 ntBASIC15.14■□□□□ 0.01
Zc3hc1Q80YV2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3hc1Q80YV2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3hc1Q80YV2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3hc1Q80YV2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Zc3hc1Q80YV2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3hc1Q80YV2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Zc3hc1Q80YV2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Zc3hc1Q80YV2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zc3hc1Q80YV2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Zc3hc1Q80YV2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zc3hc1Q80YV2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zc3hc1Q80YV2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Zc3hc1Q80YV2 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Zc3hc1Q80YV2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Zc3hc1Q80YV2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Zc3hc1Q80YV2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.13■□□□□ 0.01
Zc3hc1Q80YV2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.13■□□□□ 0.01
Zc3hc1Q80YV2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms