Protein–RNA interactions for Protein: Q3U3V8

Xrra1, X-ray radiation resistance-associated protein 1, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrra1Q3U3V8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.83■□□□□ 0.13
Xrra1Q3U3V8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Xrra1Q3U3V8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Xrra1Q3U3V8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Xrra1Q3U3V8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Xrra1Q3U3V8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Xrra1Q3U3V8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Xrra1Q3U3V8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Xrra1Q3U3V8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Xrra1Q3U3V8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Xrra1Q3U3V8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Xrra1Q3U3V8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Xrra1Q3U3V8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Xrra1Q3U3V8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Xrra1Q3U3V8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Xrra1Q3U3V8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Xrra1Q3U3V8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Xrra1Q3U3V8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Xrra1Q3U3V8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Xrra1Q3U3V8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Xrra1Q3U3V8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.82■□□□□ 0.12
Xrra1Q3U3V8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Xrra1Q3U3V8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Xrra1Q3U3V8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Xrra1Q3U3V8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Xrra1Q3U3V8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.81■□□□□ 0.12
Xrra1Q3U3V8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.81■□□□□ 0.12
Xrra1Q3U3V8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Xrra1Q3U3V8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Xrra1Q3U3V8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Xrra1Q3U3V8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Xrra1Q3U3V8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Xrra1Q3U3V8 Mir1668-201ENSMUST00000184114 107 ntBASIC15.81■□□□□ 0.12
Xrra1Q3U3V8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Xrra1Q3U3V8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.81■□□□□ 0.12
Xrra1Q3U3V8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Xrra1Q3U3V8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Xrra1Q3U3V8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Xrra1Q3U3V8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Xrra1Q3U3V8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Xrra1Q3U3V8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Xrra1Q3U3V8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Xrra1Q3U3V8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Xrra1Q3U3V8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Xrra1Q3U3V8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Xrra1Q3U3V8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Xrra1Q3U3V8 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.8■□□□□ 0.12
Xrra1Q3U3V8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Xrra1Q3U3V8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Xrra1Q3U3V8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Xrra1Q3U3V8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Xrra1Q3U3V8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
Xrra1Q3U3V8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Xrra1Q3U3V8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Xrra1Q3U3V8 Gm18101-201ENSMUST00000215769 548 ntBASIC15.8■□□□□ 0.12
Xrra1Q3U3V8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Xrra1Q3U3V8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.8■□□□□ 0.12
Xrra1Q3U3V8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.8■□□□□ 0.12
Xrra1Q3U3V8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Xrra1Q3U3V8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Xrra1Q3U3V8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Xrra1Q3U3V8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Xrra1Q3U3V8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Xrra1Q3U3V8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Xrra1Q3U3V8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Xrra1Q3U3V8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Xrra1Q3U3V8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Xrra1Q3U3V8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Xrra1Q3U3V8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.79■□□□□ 0.12
Xrra1Q3U3V8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Xrra1Q3U3V8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Xrra1Q3U3V8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Xrra1Q3U3V8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Xrra1Q3U3V8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Xrra1Q3U3V8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Xrra1Q3U3V8 Gm10013-201ENSMUST00000106074 672 ntBASIC15.79■□□□□ 0.12
Xrra1Q3U3V8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Xrra1Q3U3V8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Xrra1Q3U3V8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms