Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
COPAP53621 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COPAP53621 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.94■□□□□ 0.78
COPAP53621 MIR1224-201ENST00000408193 85 ntBASIC19.94■□□□□ 0.78
COPAP53621 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.94■□□□□ 0.78
COPAP53621 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.94■□□□□ 0.78
COPAP53621 KSR1P1-201ENST00000446298 240 ntBASIC19.94■□□□□ 0.78
COPAP53621 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.94■□□□□ 0.78
COPAP53621 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COPAP53621 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COPAP53621 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.94■□□□□ 0.78
COPAP53621 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COPAP53621 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COPAP53621 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
COPAP53621 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COPAP53621 AC116562.4-201ENST00000641316 2276 ntBASIC19.93■□□□□ 0.78
COPAP53621 AP006587.1-201ENST00000534129 1502 ntBASIC19.93■□□□□ 0.78
COPAP53621 TFP1-202ENST00000475455 1573 ntBASIC19.93■□□□□ 0.78
COPAP53621 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
COPAP53621 RCN1P1-201ENST00000400413 996 ntBASIC19.93■□□□□ 0.78
COPAP53621 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COPAP53621 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
COPAP53621 CR392000.1-201ENST00000624770 1228 ntBASIC19.93■□□□□ 0.78
COPAP53621 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COPAP53621 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COPAP53621 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COPAP53621 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COPAP53621 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COPAP53621 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.93■□□□□ 0.78
COPAP53621 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
COPAP53621 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COPAP53621 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
COPAP53621 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
COPAP53621 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPAP53621 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPAP53621 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
COPAP53621 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPAP53621 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.92■□□□□ 0.78
COPAP53621 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COPAP53621 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPAP53621 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
COPAP53621 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.92■□□□□ 0.78
COPAP53621 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.92■□□□□ 0.78
COPAP53621 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPAP53621 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.92■□□□□ 0.78
COPAP53621 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPAP53621 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPAP53621 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.92■□□□□ 0.78
COPAP53621 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.92■□□□□ 0.78
COPAP53621 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.92■□□□□ 0.78
COPAP53621 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.92■□□□□ 0.78
COPAP53621 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.92■□□□□ 0.78
COPAP53621 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.92■□□□□ 0.78
COPAP53621 AP000525.1-201ENST00000608286 694 ntBASIC19.92■□□□□ 0.78
COPAP53621 AC010331.1-201ENST00000611423 582 ntBASIC19.92■□□□□ 0.78
COPAP53621 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.92■□□□□ 0.78
COPAP53621 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPAP53621 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPAP53621 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPAP53621 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.92■□□□□ 0.78
COPAP53621 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPAP53621 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPAP53621 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.92■□□□□ 0.78
COPAP53621 KRT16P6-202ENST00000425692 1426 ntBASIC19.92■□□□□ 0.78
COPAP53621 TCF3P1-201ENST00000423021 1937 ntBASIC19.92■□□□□ 0.78
COPAP53621 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COPAP53621 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPAP53621 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPAP53621 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
COPAP53621 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPAP53621 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPAP53621 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.91■□□□□ 0.78
COPAP53621 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPAP53621 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPAP53621 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPAP53621 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
COPAP53621 UNC93B2-201ENST00000285383 730 ntBASIC19.91■□□□□ 0.78
COPAP53621 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COPAP53621 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.91■□□□□ 0.78
COPAP53621 AC116562.2-201ENST00000507042 360 ntBASIC19.91■□□□□ 0.78
COPAP53621 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.91■□□□□ 0.78
COPAP53621 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPAP53621 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
COPAP53621 KRT16P1-201ENST00000399124 1418 ntBASIC19.91■□□□□ 0.78
COPAP53621 KRT8P9-201ENST00000558927 1449 ntBASIC19.91■□□□□ 0.78
COPAP53621 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPAP53621 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
COPAP53621 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPAP53621 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPAP53621 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COPAP53621 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPAP53621 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
COPAP53621 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COPAP53621 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
COPAP53621 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.9■□□□□ 0.78
COPAP53621 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
COPAP53621 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPAP53621 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.9■□□□□ 0.78
COPAP53621 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPAP53621 C1QL1P1-201ENST00000568105 661 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms