Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 KRT8P11-201ENST00000409686 1436 ntBASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 AL691432.3-201ENST00000621860 400 ntBASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CSB-PGBD3P0DP91 GOLGA2P11-201ENST00000562660 1621 ntBASIC25.66■■□□□ 1.7
CSB-PGBD3P0DP91 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CSB-PGBD3P0DP91 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CSB-PGBD3P0DP91 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
CSB-PGBD3P0DP91 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
CSB-PGBD3P0DP91 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CSB-PGBD3P0DP91 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
CSB-PGBD3P0DP91 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
CSB-PGBD3P0DP91 STARP1-201ENST00000397973 869 ntBASIC25.66■■□□□ 1.7
CSB-PGBD3P0DP91 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC25.66■■□□□ 1.7
CSB-PGBD3P0DP91 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC25.66■■□□□ 1.7
CSB-PGBD3P0DP91 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC25.66■■□□□ 1.7
CSB-PGBD3P0DP91 HYMAI.1-201ENST00000620949 238 ntBASIC25.66■■□□□ 1.7
CSB-PGBD3P0DP91 ME2-216ENST00000639850 2331 ntTSL 5 BASIC25.66■■□□□ 1.7
CSB-PGBD3P0DP91 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
CSB-PGBD3P0DP91 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
CSB-PGBD3P0DP91 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CSB-PGBD3P0DP91 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.65■■□□□ 1.7
CSB-PGBD3P0DP91 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
CSB-PGBD3P0DP91 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CSB-PGBD3P0DP91 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC25.65■■□□□ 1.7
CSB-PGBD3P0DP91 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CSB-PGBD3P0DP91 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC25.65■■□□□ 1.7
CSB-PGBD3P0DP91 NEK4P2-201ENST00000580004 1012 ntBASIC25.65■■□□□ 1.7
CSB-PGBD3P0DP91 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC25.65■■□□□ 1.7
CSB-PGBD3P0DP91 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
CSB-PGBD3P0DP91 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
CSB-PGBD3P0DP91 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CSB-PGBD3P0DP91 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
CSB-PGBD3P0DP91 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC25.65■■□□□ 1.7
CSB-PGBD3P0DP91 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC25.65■■□□□ 1.7
CSB-PGBD3P0DP91 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC25.65■■□□□ 1.7
CSB-PGBD3P0DP91 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CSB-PGBD3P0DP91 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CSB-PGBD3P0DP91 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CSB-PGBD3P0DP91 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
CSB-PGBD3P0DP91 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC25.64■■□□□ 1.7
CSB-PGBD3P0DP91 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CSB-PGBD3P0DP91 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CSB-PGBD3P0DP91 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC25.64■■□□□ 1.7
CSB-PGBD3P0DP91 LY6E-213ENST00000522528 606 ntTSL 3 BASIC25.64■■□□□ 1.7
CSB-PGBD3P0DP91 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC25.64■■□□□ 1.7
CSB-PGBD3P0DP91 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CSB-PGBD3P0DP91 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
CSB-PGBD3P0DP91 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
CSB-PGBD3P0DP91 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC25.64■■□□□ 1.69
CSB-PGBD3P0DP91 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CSB-PGBD3P0DP91 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
CSB-PGBD3P0DP91 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CSB-PGBD3P0DP91 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CSB-PGBD3P0DP91 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CSB-PGBD3P0DP91 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC25.63■■□□□ 1.69
CSB-PGBD3P0DP91 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
CSB-PGBD3P0DP91 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CSB-PGBD3P0DP91 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC25.63■■□□□ 1.69
CSB-PGBD3P0DP91 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CSB-PGBD3P0DP91 SPDYE15P-201ENST00000424157 909 ntBASIC25.63■■□□□ 1.69
CSB-PGBD3P0DP91 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC25.63■■□□□ 1.69
CSB-PGBD3P0DP91 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC25.63■■□□□ 1.69
CSB-PGBD3P0DP91 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC25.63■■□□□ 1.69
CSB-PGBD3P0DP91 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CSB-PGBD3P0DP91 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CSB-PGBD3P0DP91 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CSB-PGBD3P0DP91 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CSB-PGBD3P0DP91 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC25.62■■□□□ 1.69
CSB-PGBD3P0DP91 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC25.62■■□□□ 1.69
CSB-PGBD3P0DP91 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC25.62■■□□□ 1.69
CSB-PGBD3P0DP91 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
CSB-PGBD3P0DP91 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CSB-PGBD3P0DP91 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CSB-PGBD3P0DP91 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CSB-PGBD3P0DP91 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CSB-PGBD3P0DP91 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CSB-PGBD3P0DP91 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CSB-PGBD3P0DP91 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC25.62■■□□□ 1.69
CSB-PGBD3P0DP91 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC25.62■■□□□ 1.69
CSB-PGBD3P0DP91 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC25.62■■□□□ 1.69
CSB-PGBD3P0DP91 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms