Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gm11841-201ENSMUST00000117060 1963 ntBASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gm10013-201ENSMUST00000106074 672 ntBASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gm6659-201ENSMUST00000174752 547 ntBASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gm7791-201ENSMUST00000219066 539 ntBASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gm37025-201ENSMUST00000195159 829 ntBASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gm16061-201ENSMUST00000122167 857 ntBASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gm18032-201ENSMUST00000222541 538 ntBASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms