Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Igkv16-104A0A0B4J1I1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv16-104A0A0B4J1I1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv16-104A0A0B4J1I1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv16-104A0A0B4J1I1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv16-104A0A0B4J1I1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Igkv16-104A0A0B4J1I1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Igkv16-104A0A0B4J1I1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Igkv16-104A0A0B4J1I1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gm11780-201ENSMUST00000136880 516 ntBASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gm6089-201ENSMUST00000197666 938 ntBASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 AV026068-213ENSMUST00000223675 1171 ntBASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gm15590-201ENSMUST00000078419 552 ntBASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gm6550-201ENSMUST00000187574 993 ntBASIC16.68■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gm5264-201ENSMUST00000190584 848 ntBASIC16.68■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gm9172-201ENSMUST00000212092 954 ntBASIC16.68■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv16-104A0A0B4J1I1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.68■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv16-104A0A0B4J1I1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.67■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gm25406-201ENSMUST00000157599 105 ntBASIC16.67■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.67■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.67■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Gm8655-201ENSMUST00000221159 852 ntBASIC16.67■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Igkv16-104A0A0B4J1I1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms