Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.58□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Gm37025-201ENSMUST00000195159 829 ntBASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Gm27000-201ENSMUST00000182943 842 ntBASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Trav15-2-dv6-2A0A075B650 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms